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. 2013 Jun 25;8(6):e67483. doi: 10.1371/journal.pone.0067483

Table 2. Alternative PPARα 5′UTR exon/intron junctions conform to the GT-AG splice site rule.

Transcript Exon (bp) 5′ Donor Splice Site Consensus5′-gtaagt-3′ 3′ Acceptor Splice Site Consensus5′-PyPyPyPyPyPyncag-3′ Exon (bp)
Adipose P1 1A (60) CCTCAGgtgccc cgttctatagCCAAGA 2 (87)
2 (87) TCACAGgtaaga cctcctacagATTGGT 3 (247)
Liver P2 1B (318) GGCGAGgtaact cgttctatagCCAAGA 2 (87)
2 (87) TCACAGgtaaga cctcctacagATTGGT 3 (247)
Liver P3 2A (145) CTTCTGgtaggt cctcctacagATTGGT 3 (247)

5′ (donor) and 3′ (acceptor) intron splice site consensus sequences are indicated. The sequences at P1, P2 and P3 transcript exon/intron boundaries are shown. Splice site sequences within introns are shown in lowercase; Exons are shown in capitals, and sizes of exons are given. All transcript exon boundaries conform to the GT-AG splice site rule.