Table 1. The parameters of selective pressure forHoxb9 in dolphin from genomic data.
Model | Inl | Estimates of parameters | |||||
MD | −1471.717609 | Ω = 0.0729 | |||||
MI | −1460.844369 | ωdolphin = 0.1706 | |||||
Branch Models | |||||||
Dolphin | −1470.859301 | ωdolphin = 0.1722 | Ω0 = 0.0654 | ||||
Dolphinωdolphin | −1474.048375 | Ω0 = 0.0654 | |||||
Branch-Site Test 2 | |||||||
Dolphin | −1467.388728 | Site class | 0 | 1 | 2a | 2b | Positively selected site |
proportion | 0.98549 | 0.00523 | 0.00923 | 0.00005 | 175 P 0.996 | ||
background Ω | 0.06050 | 1.00000 | 0.06050 | 1.00000 | |||
foreground Ω | 0.06050 | 1.00000 | 22.91392 | 22.91392 | |||
Dolphinωdolphin | −1469.322896 | Site class | 0 | 1 | 2a | 2b | |
proportion | 0.89723 | 0.00523 | 0.00923 | 0.00005 | |||
background Ω | 0.05851 | 1.00000 | 0.058 51 | 1.00000 | |||
foreground Ω | 0.05851 | 1.00000 | 1.00000 | 1.00000 |