Table 2. Histone H3K9 acetylation and OsSRT1-binding on retrotransposons.
Copia | Gypsy | Total LTR | LINE | SINE | Total Retro-elements | |
H3K9ac in WT | 222(1) | 690(1) | 974(1) | 289(0.154) | 378(0.0226) | 1641(1) |
H3K9ac in RNAi | 232(1) | 739(1) | 1032(1) | 316*(3.36E-04) | 312(0.810) | 1660(1) |
H3K9ac increasein RNAi | 89(1) | 277(1) | 383(1) | 126*(2.70E-04) | 97(0.638) | 606(1) |
SRT1-binding(Fisher) | 50(0.0899) | 287*(0) | 350*(0) | 44*(1.18E-05) | 22(0.0864) | 416*(7.67E-12) |
Genome-wide | 12562 | 54330 | 69998 | 6627 | 8304 | 84929 |
In parentheses are indicated p-values calculated with Hypergeometric distribution tests or with Fischer exact tests as indicated.
Significance of enrichment with p-value<0.01.