Table 1.
Applied scores for local clues
| Pattern name | Description | Score |
|---|---|---|
| Dictionary |
Matches dictionary |
+5.50 |
| Title |
Matches title pattern |
+4.00 |
| Enum |
Is part of a known resource enumeration |
+3.00 |
| Hearst |
Is part of a Hearst pattern |
+4.00 |
| “Good” Head |
Associated with a positive head term |
+2.00 |
| Version |
Followed by a version number |
+3.00 |
| Reference |
Followed by a reference |
+1.00 |
| Hyper-Link |
Followed by a hyper-link or URL |
+1.50 |
| Mixed Case |
Is MiXeD CaSe |
+1.00 |
| Upper Case |
Is UPPER CASE |
+0.50 |
| Bioconductor |
Matches Bioconductor dictionary |
-1.75 |
| Dictionary Word |
Is an English dictionary word |
-4.00 |
| Known Acronym |
Is a known bio-acronym |
-15.00 |
| Negative Head |
Associated with a negative head term |
-15.00 |
| Lower Case |
Is lower case |
-1.00 |
| Partial-Word |
Is only a part of a word |
-15.00 |
| Compound Factor |
Term fires multiple positive clues |
+0.50 |
| Weak | Associated with a weak identifier | +0.50 |
bioNerDS’ various score adjustments.