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. 2013 Jun 22;13:130. doi: 10.1186/1471-2148-13-130

Table 2.

Summary of the number of isolates, length of gene fragment, haplotype number, haplotype diversity, and haplotype frequencies for Trinidad and Mexico populations of Colletotrichum gloeosporioides sensu lato and C. truncatum

 
ACT
GPDH
B-TUB
ITS
  Trinidad Mexico Trinidad Mexico Trinidad Mexico Trinidad Mexico
(a)
# isolates
30
17
30
17
30
17
30
17
Common sequence length, nt
174
174
221
221
301
301
496
496
No. of haplotypes, h
14
10
12
6
3
6
10
7
Haplotype diversity, Hd
0.922
0.863
0.852
0.800
0.576
0.768
0.786
0.811
Pairwise comparisons
 
 
 
 
 
 
 
 
Total # haplotypes, hT
23
 
16
 
9
 
14
 
Total haplotype diversity, HdT
0.945
 
0.849
 
0.816
 
0.822
 
(b)
 
 
 
 
 
 
 
 
# isolates
8
13
8
13
8
13
8
13
Common sequence length, nt
174
174
221
221
301
301
496
496
No. of haplotypes, h
2
2
1
3
1
4
1
4
Haplotype diversity, Hd
0.571
0.667
0
0.356
0
0.533
0
0.378
Pairwise comparisons
 
 
 
 
 
 
 
 
Total # haplotypes
4
 
2
 
5
 
4
 
Total haplotype diversity, Hdt 0.676   0.209   0.679   0.634