Table 3.
Subsystem classification for essential reactions predicted for all metabolic models under anaerobic conditions
| Source | iEcoli_core | iSalcoli_core | iEntero_core |
|---|---|---|---|
| Essential reactions |
284 |
286 |
326 |
| Essential reactions subsystem classification |
|
|
|
| Alternate Carbon Metabolism |
2 |
2 |
2 |
| Amino Acid Metabolism |
82 |
82 |
84 |
| Cell Envelope Biosynthesis |
45 |
45 |
45 |
| Citric Acid Cycle |
4 |
4 |
5 |
| Cofactor and Prosthetic Group Biosynthesis |
66 |
66 |
69 |
| Folate Metabolism |
2 |
2 |
4 |
| Glycerophospholipid Metabolism |
10 |
10 |
10 |
| Glycolysis |
1 |
1 |
10 |
| Inorganic Ion Transport and Metabolism |
8 |
9 |
12 |
| Lipopolysaccharide Biosynthesis / Recycling |
11 |
11 |
11 |
| Membrane Lipid Metabolism |
2 |
2 |
4 |
| Murein Biosynthesis |
2 |
2 |
2 |
| Pentose Phosphate pathway |
2 |
2 |
3 |
| Purine and Pyrimidine Metabolism |
26 |
26 |
34 |
| Transport, Inner Membrane |
4 |
5 |
8 |
| Transport, Outer Membrane |
15 |
15 |
19 |
| Unassigned | 2 | 2 | 4 |