Table 2. Important candidate QTL regions associated with the residual feed intake (RFI) by 1 Mb SNP windows.
SSC | Location (start-end) in Mb@ | 1 Mb SNP window | Percent genetic variance explained | PPA* (P>0) | Genes within the SNP window$ | Previously reported important QTL at the SNP window |
14 | 59.00–59.98 | H3GA0040291-MARC0009335 | 1.16 | 0.682 | GPR137B, LYST, GNG4, B3GALNT, TBCE | Daily feed intake and body weight |
7 | 39.01–39.98 | ALGA0040519-ASGA0032851 | 0.59 | 0.480 | BTBD9, GLO1, DNAH8, GLP1R, KCNK5, KCNK17 | Average daily gain and body weight |
7 | 16.06–16.97 | ALGA0038863-DRGA0007204 | 0.45 | 0.412 | ID4, MBOAT1, E2F3, CDKAL1 | Average daily gain and body weight |
14 | 90.03–90.96 | ASGA0064826-ALGA0079379 | 0.40 | 0.336 | 5S - rRNA | Average daily gain and body weight |
The 1 Mb windows are presented in descending order based on the percent genetic variance explained greater than 0.4%.
Posterior probability that the SNPs in 1 Mb window could explain the genetic variance greater than zero (PPA: Posterior probability of association).