Table 1. DESeq top ranking differentially expressed genes.

EnsemblID	GeneSymbol	Mean-stimu	Mean-unstimu	ratio(stimu/unstimu)	log2Ratio	pvalue	adjustedPvalue	DSeqPosition	affy Mapped ID
ENSG00000151503	NCAPD3	3725.06	78.04	47.73	5.58	0.00E+00	0.00E+00	1	212789 at
ENSG00000096060	FKBP5	1605.85	47.32	33.94	5.08	0.00E+00	0.00E+00	2	204560 at
ENSG00000116133	DHCR24	1997.42	192.42	10.38	3.38	0.00E+00	0.00E+00	3	200862 at
ENSG00000156689	GLYATL2	1652.52	157.72	10.48	3.39	1.83E-317	1.47E-313	4	not Found In Annotation File
ENSG00000113594	LIFR	1030.64	54.44	18.93	4.24	7.33E-311	4.72E-307	5	205876 at
ENSG00000166451	CENPN	752.57	22.15	33.98	5.09	3.96E-299	2.12E-295	6	219555 s at, 222118 at
ENSG00000115648	MLPH	2733.96	422.61	6.47	2.69	2.81E-286	1.29E-282	7	218211 s at
ENSG00000244324	RP11-67L3.6	884.95	73.73	12.00	3.59	7.97E-235	3.21E-231	8	not Found In Annotation File
ENSG00000116285	ERRFI1	642.06	33.44	19.20	4.26	1.44E-226	5.14E-223	9	not Found In Annotation File
ENSG00000130066	SAT1	1049.43	138.12	7.60	2.93	3.58E-197	1.15E-193	10	213988 s at, 210592 s at, 203455 s at

The top 10 genes that were retrieved by DESeq using the R-Cloud on EBI for the LNCaP dataset. Expression ratio is (stimulated/un-stimulated). See Table S1 for the full list of differentially expressed genes returned by the DESeq analysis.