Table 3. The gene signature from the NGS dataset using DESeq analysis and their positions in the microarray DEGs by SamR.

ProbeSetID	GeneSymbol	EnsemblID	log2Ratio	adjustedPvalue	DESeqPosition	SamRposition	SamRlog2FC	SamRq-value(%)
212789 at	NCAPD3	ENSG00000151503	5.58	0	1	96	1.23	0.00
204560 at	FKBP5	ENSG00000096060	5.08	0	2	30	2.04	0.00
200862 at	DHCR24	ENSG00000116133	3.38	0	3	91	1.14	0.00
205876 at	LIFR	ENSG00000113594	4.24	4.72E-307	5	374	0.68	0.89
219555 s at	CENPN	ENSG00000166451	5.09	2.12E-295	6	29	1.93	0.00
222118 at	CENPN	ENSG00000166451	5.09	2.12E-295	6	11	2.58	0.00
218211 s at	MLPH	ENSG00000115648	2.69	1.29E-282	7	913	0.47	3.09
203455 s at	SAT1	ENSG00000130066	2.93	1.15E-193	10	146	0.95	0.32
210592 s at	SAT1	ENSG00000130066	2.93	1.15E-193	10	161	0.91	0.32
213988 s at	SAT1	ENSG00000130066	2.93	1.15E-193	10	148	0.95	0.32

The list of identifiers and their associated genes extracted from the NGS dataset using DESeq analysis and put to the sscMap. We established where these genes were located in full list (Table S3) of statistically differentially expressed genes returned by the SamR analysis on the microarray dataset. All these genes lay within a SamR reported FDR of . Table S4 also contains the signed ranks of these 10 probesetIDs in the 6 instances of reference profiles for cotinine.