TABLE 1.
Recovery of rHPIV1 bearing codon substitution mutations at amino acid position 942 in the L protein
Virus | Codona | No. of nucleotide changes needed to restore wild-type amino acid | rHPIV1 mutant recovered | Adventitious coding mutations in L ORF |
---|---|---|---|---|
rHPIV1 wild type | TAT, TAC | 0 | + | NDb |
rHPIV1-Y942H | CAC | 1 | + | None |
rHPIV1-Y942Cc | TGC | 1 | + | None |
rHPIV1-Y942F | TTT | 1 | + | None |
rHPIV1-Y942Nc | AAC | 1 | + | None |
rHPIV1-Y942Dc | GAC | 1 | + | None |
rHPIV1-Y942S | AGC | 2 | + | None |
rHPIV1-Y942W | TGG | 2 | + | None |
rHPIV1-Y942Q | CAG | 2 | + | S1302N |
rHPIV1-Y942K | AAA | 2 | −d | ND |
rHPIV1-Y942I | ATC | 2 | − | ND |
rHPIV1-Y942E | GAG | 2 | − | ND |
rHPIV1-Y942Mc | ATG | 3 | + | L1367S |
rHPIV1-Y942A | GCG | 3 | + | None |
rHPIV1-Y942Tc | ACA | 3 | + | None |
rHPIV1-Y942G | GGG | 3 | + | None |
rHPIV1-Y942Vc | GTG | 3 | + | G1755Q |
rHPIV1-Y942Lc | CTG | 3 | + | None |
rHPIV1-Y942R | CGG | 3 | − | ND |
rHPIV1-Y942P | CCG | 3 | − | ND |
In the case of wild type, the two possible codons yielding the wild-type amino acid for tyrosine (Y) are shown; for each mutant, the codon chosen for introduction into rHPIV1 is shown.
ND, not done. The L gene sequence was not confirmed either because the virus is the previously sequenced wild type or because the virus was not recovered.
Virus was recovered with pTML containing the indicated codon substitution. The other viruses were recovered using wild-type pTML.
−, not recovered.