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Number of reads (hard clipped at 200 bp) mapping with quality above the given thresholds
 |
 |
 |
|
|---|---|---|---|
| Baseline | 5 463 391 | 4 867 523 | 4 857 829 |
| FlowgramFixer | 5 617 599 | 5 098 930 | 5 088 117 |
| Difference | 154 208 | 231 407 | 230 288 |
| Improvement (%) | 2.8 | 4.8 | 4.7 |
Note: We used 20, 30 and 40 as 
thresholds, corresponding to mis-alignment probabilities of 0.01, 0.001 and 0.0001, respectively. FlowgramFixer is able to accurately map up to 4.8% more reads than the baseline.
