Table 1. PHAS Loci and Their Triggers Identified in Peach.
| Trigger miRNA | PHAS Loci or Gene Families | Loci or Gene No. | P Valuea | References |
|---|---|---|---|---|
| ppe-miR390 | TAS3 | 1 | 0 | Allen et al. (2005, 2006); Zhu et al. (2012) |
| ppe-miR828 | TAS4 | 1 | 0 | Rajagopalan et al. (2006); Zhu et al. (2012) |
| ppe-miR828 | MYB | 5 (1)b | 0 | Xia et al. (2012); Zhu et al. (2012) |
| ppe-miR482/2118 | NB-LRR | 94 (14) | 0 | Zhai et al. (2011) |
| ppe-miR7122 | PPR | 20 (3) | 0 | Chen et al. (2007, 2010); Howell et al. (2007); Zhai et al. (2011) |
| ppe-miR393 | TIR/AFB | 2 | 0 | Chen et al. (2010); Si-Ammour et al. (2011); Zhai et al. (2011) |
| TasiARF | ARF | 3 | 9.09E-06 | Axtell et al. (2006) |
| ppe-miR408 | Laccase | 2 | 4E-10 | |
| ppe-miR4376 | Ca2+-ATPase | 3 | 0 | Wang et al. (2011) |
| NAc | NAC | 6 (3) | 3.67E-05 | Zhai et al. (2011) |
| ppe-miR168 | AGO | 2 (1) | 0.000743 | Chen et al. (2010); Zhai et al. (2011) |
| NA | SGS | 2 | 0 | Zhai et al. (2011) |
| NA | DCL | 1 | 0.000386 | Zhai et al. (2011) |
| NA | ATP TR | 5 | 0 | Zhai et al. (2011) |
| NA | UDP-glucosyl transferase | 5 (3) | 0.000533 | |
| NA | RD22 | 17 (1) | 4.5E-10 | |
| NA | Kinase-like | 10 (4) | 5.97E-06 | Zhai et al. (2011) |
a
Median P value was used for gene families with greater than or equal to two PHAS genes identified.
b
The value in parentheses indicates the number of additional PHAS genes with a P value > 0.001 in the corresponding gene family
c
NA, not available; ARF, AUXIN-RESPONSIVE FACTOR; RD22, RESPONSIVE TO DEHYDRATION22; ATP TR, ATP binding/protein binding/transmembrane receptor.