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. 2013 May 14;25(5):1756–1773. doi: 10.1105/tpc.113.111393

Table 2. In Vitro MYR Assay of Various Peptides Using Recombinant Wild-Type NMT1 and NMT1A160T.

NMT1a
Protein of Originb Substrate Assayed Km (µM) kcat (s−1) kcat/Km (103 M−1⋅s−1)
ARFA1adf GLSFAKLFRR 29 ± 5 0.65 ± 0.03 21.9
TRXh2 GGALSTVF 60 ± 17 0.28 ± 0.03 4.6
TRXh7 GSNVSSVH 301 ± 41 0.26 ± 0.02 0.88
TRXh8 GANVSTPD 545 ± 159 0.55 ± 0.11 1.0
TRXh9 GGSCVSKGK 18 ± 3 0.027 ± 0.011 1.5
PLL5 GNGVTKLS 12 ± 4 0.15 ± 0.07 11.9
RPS5-like GGCVSVQV 2.4 ± 0.4 0.075 ± 0.001 31.7
SOS3 GCSVSKKK 7.4 ± 2.2 0.091 ± 0.004 13.0
SOS3 Myr-CoA 1.7 ± 0.3 0.153 ± 0.007 89
NMT1A160Ta
Protein of Originb Substrate Assayed Km (µM) kcat (s−1) kcat/Km (103 M−1⋅s−1) Reduction of kcat/Km (Fold versus Wild Type)
ARFA1adf GLSFAKLFRR 68 ± 14 0.091 ± 0.006 1.3 16.5
TRXh2 GGALSTVF 197 ± 53 0.044 ± 0.001 0.22 21
TRXh7 GSNVSSVH 176 ± 54 0.05 ± 0.01 0.27 3.3
TRXh8 GANVSTPD 926 ± 301 0.18 ± 0.03 0.20 5
TRXh9 GGSCVSKGK 106 ± 28 0.029 ± 0.004 0.28 5.2
PLL5 GNGVTKLS 36 ± 2 0.028 ± 0.002 0.76 16
RPS5-like GGCVSVQV 50 ± 8 0.034 ± 0.002 0.67 47
SOS3 GCSVSKKK 57 ± 11 0.069 ± 0.004 1.18 11
SOS3 Myr-CoA 38 ± 11 0.062 ± 0.007 1.63 54
a

Kinetic parameters obtained from an in vitro continuous fluorigenic NMT assay and several N-terminal peptides (Traverso et al., 2013a).

b

N-terminal octapeptides (from amino acids 2 to 9) were derived from Arabidopsis proteins for which MYR was previously predicted and/or reported (Traverso et al., 2013a, 2013b). The kcat/Km value reflects the catalytic efficiency of each peptide to be MYRed by the NMT enzyme.