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. 2013 Jun 28;8(6):e67944. doi: 10.1371/journal.pone.0067944

Table 2. Genetic diversity parameters of Spongospora subterranea f.sp. subterranea within the sampled regions, determined using six microsatellite markers.

Region Na cnumb ssgc cfd Ge Hf IA g
Europe 215 26 11 0.88 0.885 0.225 0.0339***
Africa 57 21 13 0.63 0.917 0.234 0.0144ns
Asia 98 16 7 0.84 0.835 0.249 0.0673***
Australasia 170 16 2 0.91 0.878 0.21 0.0131***
North America 26 3 1 0.89 0.151 0.013 na
Total Introduced 566 49 34 0.91 0.91 0.235 0.0205**
South America Root galls 39 29 26 0.23 0.983 0.391 0.0630**
South America Tuber lesions 88 55 54 0.38 0.972 0.314 0.0269*
Total Native 127 82 81 0.35 0.985 0.461 0.1138***
a

N = Sample size.

b

cnum = Number of multilocus genotypes.

c

ssg = Site-specific genotypes; clones specific to a region and not shared with other regions.

d

cf = Clonal fraction; proportion of individual samples originating from asexual reproduction.

e

G = Nei’s corrected diversity (genotypic diversity).

f

H = Nei’s Gene Diversity.

g

IA = Index of association to tests the null hypothesis of linkage equilibrium for multilocus data. Significance of deviation from equilibrium expectations are indicated by asterisks. *, p<0.05, **, p<0.01, ***, p<0.001; ns = non-significant; na = not enough diversity for estimation.