Table 2. Genetic diversity parameters of Spongospora subterranea f.sp. subterranea within the sampled regions, determined using six microsatellite markers.
Region | Na | cnumb | ssgc | cfd | Ge | Hf | IA g |
Europe | 215 | 26 | 11 | 0.88 | 0.885 | 0.225 | 0.0339*** |
Africa | 57 | 21 | 13 | 0.63 | 0.917 | 0.234 | 0.0144ns |
Asia | 98 | 16 | 7 | 0.84 | 0.835 | 0.249 | 0.0673*** |
Australasia | 170 | 16 | 2 | 0.91 | 0.878 | 0.21 | 0.0131*** |
North America | 26 | 3 | 1 | 0.89 | 0.151 | 0.013 | na |
Total Introduced | 566 | 49 | 34 | 0.91 | 0.91 | 0.235 | 0.0205** |
South America Root galls | 39 | 29 | 26 | 0.23 | 0.983 | 0.391 | 0.0630** |
South America Tuber lesions | 88 | 55 | 54 | 0.38 | 0.972 | 0.314 | 0.0269* |
Total Native | 127 | 82 | 81 | 0.35 | 0.985 | 0.461 | 0.1138*** |
N = Sample size.
cnum = Number of multilocus genotypes.
ssg = Site-specific genotypes; clones specific to a region and not shared with other regions.
cf = Clonal fraction; proportion of individual samples originating from asexual reproduction.
G = Nei’s corrected diversity (genotypic diversity).
H = Nei’s Gene Diversity.
IA = Index of association to tests the null hypothesis of linkage equilibrium for multilocus data. Significance of deviation from equilibrium expectations are indicated by asterisks. *, p<0.05, **, p<0.01, ***, p<0.001; ns = non-significant; na = not enough diversity for estimation.