Table 1-5.

Mean overlap quantities (± SEM) by size of CNV call.

	Size of CNV call
	3-5 SNPs	6-10 SNPs	11-22 SNPs	23-54 SNPs	> 54 SNPs	All
Avg num of CNVs/person*	13	19.2	18.6	13.4	3.5	67.6
Duplicate concordance rate	0.31 (±0.02)	0.49 (±0.02)	0.48 (±0.02)	0.55 (±0.03)	0.64 (±0.04)	0.45 (±0.02)
Unrelated pair concordance rate	0.07 (±0.004)	0.11 (±0.004)	0.12 (±0.005)	0.23 (±0.008)	0.16 (±0.01)	0.13 (±0.004)
Father-child transmission rate	0.18 (±0.007)	0.29 (±0.006)	0.30 (±0.008)	0.41 (±0.01)	0.42 (±0.02)	0.28 (±0.005)
Mother-child transmission rate	0.19 (±0.007)	0.27 (±0.006)	0.30 (±0.008)	0.40 (±0.01)	0.43 (±0.02)	0.27 (±0.005)

^*In all 1736 non-duplicate samples.