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. 2013 Apr 30;288(26):18923–18938. doi: 10.1074/jbc.M113.467316

TABLE 3.

Effect of LXCXE and E2F peptide ligands on RbAB thermal stability

All measurements were performed at 2 μm RbAB and 20 μm peptides. Buffer was 20 mm sodium phosphate, pH 7, 2 mm DTT, and 0.01% Tween 20 at the specified NaCl concentration. Scan speed, 3 °C/min. NA, not assessed; pS, phosphoserine.

Peptide Sequencea ΔTm(app)
ΔGBINDb
0.05 m NaCl 0.6 m NaCl 0.05 m NaCl 0.6 m NaCl
°C kcal/mol
E7(16–31) QPETTDLYCYEQLNDS 10.6 ± 0.2 8.7 ± 0.2 −12.6 −10.6
E7(16–40) QPETTDLYCYEQLNDSSEEEDEIDG 12.2 ± 0.2 8.8 ± 0.2 −13.1 −10.4
E7(16–40)PP QPETTDLYCYEQLNDpSpSEEEDEIDG 12.5 ± 0.2 10.1 ± 0.2 −14.4 −11.0
E7N HPV-16 MHGDTPTLHEYMLDLQPETTDLYCYEQLNDSSEEEDEIDG 12.5 ± 0.2 NA −13.4 NA
E7N HPV-18 MHGPKATLQDIVLHLEPQNEIPVDLLCHEQLSDSEEENDEIDG 12.2 ± 0.2 NA −12.1 NA
E7N HPV-11 MHGRLVTLKDIVLDLQPPDPVGLHCYEQLEDSSEDEVDKVDK 7.9 ± 0.2 NA −10.2 NA
E2F2-TD DDYLWGLEAGEGISDLFD 9.4 ± 0.2c NA NA NA

a The HPV E7 LXCXE and the E2F-TD helix motifs are underlined and in bold.

b Values were taken from Ref. 56.

c Measurements were performed at 0.2 m NaCl.