Reaction-induced FTIR detection of the protonated water cluster, W5+, produced by the S1-to-S2 transition. (A) Positive 2,880-cm−1 band from the cationic water cluster in calcium PSII (black), compared with calcium-depleted (gray). (B) Calcium PSII after treatment with 100 mM ammonia (black), compared with calcium-depleted (gray; repeated from A, gray). (C) Calcium PSII after exchange into 2H2O buffer (black), compared with calcium-depleted in 1H2O buffer (gray; repeated from A, gray). The O–D stretching band in C, black has been omitted for clarity. The calcium-depleted difference spectrum was acquired with a single flash to a dark-adapted sample and corresponds to S2′-minus-S1. (D) Baseline (S1-minus-S1) acquired from dark-adapted, calcium-depleted PSII. Spectra are averages of 31 (A, black), 16 (B, black), 12 (C, black), and 15 (A–D, gray) samples. y axis ticks represent 1 × 10−4 absorbance units. The temperature was 263 K.