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. 2013 Jul;79(14):4347–4358. doi: 10.1128/AEM.00474-13

Table 4.

Association between generic E. coli-contaminated spinach and risk factors assessed in the univariate mixed-effect logistic regression analysis with farm and visit as random effects

Variable (comparison level) Frequencya Reference level OR (95% CI)b P valuec
Farm management factor
    Human
        toilets (yes)d 930/955 No 0.08 (0.01, 0.99) 0.049
    Farm and field conditions
        organic_certified (yes) 175/200 No 0.05 (0.00, 0.65) 0.022
        before_rotavated (yes) 490/955 No 0.21 (0.08, 0.54) 0.001
        tillage_time (>17 days) 85/185 ≤17 days 0.02 (0.00, 0.16) <0.001
    Fertilizers
        manure_application (yes) 160/955 No 7.9 (1.6, 39.4) 0.011
        manure_time (>200 days) 60/140 ≤200 days 0.08 (0.01, 0.90) 0.041
        manure_age (>13 wk) 20/150 ≤13 wk 156.6 (0.2, 114,716.7) 0.133
        manure_source (poultry farm) 90/150 Dairy farm 11.4 (1.1, 123.5) 0.045
        compost_application (yes) 140/955 No 0.08 (0.00, 2.02) 0.127
    Irrigation
        irrigation_time (>5 days) 365/845 ≤5 days 0.17 (0.05, 0.59) 0.005
        irrigation_source_pond (yes) 20/955 No 24.4 (2.1, 280.1) 0.010
        irrigation_source_well (yes) 635/955 No 0.30 (0.06, 1.51) 0.144
        irrigation_source_reservoirs (yes) 160/955 No 0.08 (0.01, 0.40) 0.002
    Equipment
        own_equipment (yes) 865/955 No 9.1 (2.4, 34.6) 0.001
    Planting_time (>66 days) 465/955 ≤66 days 2.6 (1.3, 5.2) 0.008
Farm environmental factors
    Terrain, buffer zone, and proximity
        terrain (sloped) 165/955 Flat 8.3 (2.5, 27.3) <0.001
        buffer_fence (yes) 165/895 No 4.8 (1.9, 12.0) 0.001
        proximity_beef (yes) 120/955 No 6.0 (0.5, 79.1) 0.174
        proximity_poultry (yes) 110/955 No 8.7 (0.9, 88.0) 0.067
        proximity_forest (yes) 60/955 No 0.11 (0.03, 0.43) 0.002
        proximity_roadways (yes) 895/955 No 0.07 (0.02, 0.28) <0.001
    Domestic/wild animals
        wildlife_control (yes) 505/910 No 5.0 (1.9, 13.2) 0.001
        domestic_animal (yes) 25/935 No 11.8 (1.1, 122.9) 0.039
    Farm_location (Southwestern U.S.) 480/955 Western U.S. 4.4 (0.8, 25.5) 0.096
a

Frequency is the number of observations with the comparison level/total number of recorded observations for the variable.

b

OR (95% CI), odds ratio with 95% confidence interval.

c

Only variables with P values of <0.2 are shown.

d

The estimated OR (95% CI) value applies to each factor in the “hygiene-field status” group: toilet_training (yes versus no), washing_stations (yes versus no), field_grazed (no versus yes), and before_hay (no versus yes).