Table 3.
Condition | Detected substance | Amt ±SD (mM) by time in min after addition of 1 mM of: |
||||||
---|---|---|---|---|---|---|---|---|
CoA |
3HB-CoA |
|||||||
5 | 10 | 30 | 60 | 90 | 30 | 90 | ||
1. H16 nPHB | CoA | 0.84 ± 0.12 | 0.87 ± 0.06 | 0.79 ± 0.06 | 0.68 ± 0.13 | 0.66 ± 0.06 | 0.53 ± 0.14 | 0.49 ± 0.11 |
3HB-CoA | 0.03 ± 0.03 | 0.08 ± 0.05 | 0.14 ± 0.04 | 0.20 ± 0.06 | 0.21 ± 0.05 | 0.45 ± 0.12 | 0.40 ± 0.13 | |
Crot-CoA | <0.02 | 0.04 ± 0.02 | 0.05 ± 0.02 | 0.06 ± 0.02 | 0.06 ± 0.02 | 0.11 ± 0.05 | 0.11 ± 0.05 | |
2. H16 ΔphaP1 nPHB | CoA | ND | 0.87 ± 0.12 | 0.88 ± 0.12 | 0.89 ± 0.10 | 0.89 ± 0.10 | 0.60 ± 0.05 | 0.52 ± 0.11 |
3HB-CoA | ND | <0.02 | <0.02 | 0.02 ± 0.02 | 0.02 ± 0.02 | 0.50 ± 0.04 | 0.43 ± 0.02 | |
Crot-CoA | ND | <0.02 | <0.02 | <0.02 | <0.02 | 0.16 ± 0.01 | 0.16 ± 0.01 | |
3. H16 ΔphaP1 ΔphaP2 ΩKm ΔphaP3 ΔphaP4 nPHB | CoA | 0.74 ± 0.11 | 0.69 ± 0.15 | 0.70 ± 0.09 | 0.67 ± 0.10 | 0.63 ± 0.11 | 0.49 ± 0.03 | 0.40 ± 0.08 |
3HB-CoA | <0.02 | <0.02 | 0.04 ± 0.01 | 0.05 ± 0.02 | 0.06 ± 0.02 | 0.52 ± 0.01 | 0.43 ± 0.00 | |
Crot-CoA | <0.02 | <0.02 | <0.02 | 0.03 ± 0.02 | 0.03 ± 0.02 | 0.17 ± 0.00 | 0.16 ± 0.00 |
Degradation assays were performed as described in Materials and Methods. The amounts of coenzyme A (CoA), 3-hydroxybutyryl–CoA (3HB-CoA), and crotonyl-CoA (Crot-CoA) were calculated from HPLC peak areas. The values represent the averages from up to 4 assay repetitions and are presented in mM. ND, not determined.