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. 2013 Jul;195(14):3213–3223. doi: 10.1128/JB.00358-13

Table 3.

Assay of in vitro degradation of nPHB granules isolated from R. eutrophaa

Condition Detected substance Amt ±SD (mM) by time in min after addition of 1 mM of:
CoA
3HB-CoA
5 10 30 60 90 30 90
1. H16 nPHB CoA 0.84 ± 0.12 0.87 ± 0.06 0.79 ± 0.06 0.68 ± 0.13 0.66 ± 0.06 0.53 ± 0.14 0.49 ± 0.11
3HB-CoA 0.03 ± 0.03 0.08 ± 0.05 0.14 ± 0.04 0.20 ± 0.06 0.21 ± 0.05 0.45 ± 0.12 0.40 ± 0.13
Crot-CoA <0.02 0.04 ± 0.02 0.05 ± 0.02 0.06 ± 0.02 0.06 ± 0.02 0.11 ± 0.05 0.11 ± 0.05
2. H16 ΔphaP1 nPHB CoA ND 0.87 ± 0.12 0.88 ± 0.12 0.89 ± 0.10 0.89 ± 0.10 0.60 ± 0.05 0.52 ± 0.11
3HB-CoA ND <0.02 <0.02 0.02 ± 0.02 0.02 ± 0.02 0.50 ± 0.04 0.43 ± 0.02
Crot-CoA ND <0.02 <0.02 <0.02 <0.02 0.16 ± 0.01 0.16 ± 0.01
3. H16 ΔphaP1 ΔphaP2 ΩKm ΔphaP3 ΔphaP4 nPHB CoA 0.74 ± 0.11 0.69 ± 0.15 0.70 ± 0.09 0.67 ± 0.10 0.63 ± 0.11 0.49 ± 0.03 0.40 ± 0.08
3HB-CoA <0.02 <0.02 0.04 ± 0.01 0.05 ± 0.02 0.06 ± 0.02 0.52 ± 0.01 0.43 ± 0.00
Crot-CoA <0.02 <0.02 <0.02 0.03 ± 0.02 0.03 ± 0.02 0.17 ± 0.00 0.16 ± 0.00
a

Degradation assays were performed as described in Materials and Methods. The amounts of coenzyme A (CoA), 3-hydroxybutyryl–CoA (3HB-CoA), and crotonyl-CoA (Crot-CoA) were calculated from HPLC peak areas. The values represent the averages from up to 4 assay repetitions and are presented in mM. ND, not determined.