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. 2013 Jun 16;12:63. doi: 10.1186/1476-4598-12-63

Table 4.

GSEA summary of pathways associated with genes up regulated in IGFBP2 positive tumors

NAME SIZE NOM p-val FDR q-val FWER p-val
KEGG_MAPK_SIGNALING_PATHWAY
43
0
0
0
KEGG_LEISHMANIA_INFECTION
20
0
0
0
KEGG_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION
35
0
0.007717
0.013
KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS
19
0.001976
0.006687
0.015
KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY
19
0.00211
0.016915
0.045
KEGG_FOCAL_ADHESION
30
0.007619
0.025984
0.084
KEGG_COMPLEMENT_AND_COAGULATION_CASCADES
16
0.015968
0.023016
0.087
KEGG_ECM_RECEPTOR_INTERACTION
15
0.002053
0.022288
0.096
KEGG_CHEMOKINE_SIGNALING_PATHWAY
32
0.008403
0.020502
0.1
KEGG_APOPTOSIS
20
0.008584
0.018452
0.1
KEGG_VIRAL_MYOCARDITIS
17
0.005906
0.017723
0.105
KEGG_NATURAL_KILLER_CELL_MEDIATED_CYTOTOXICITY
27
0.028902
0.037213
0.228
KEGG_GNRH_SIGNALING_PATHWAY
19
0.044444
0.113272
0.563
KEGG_CELL_ADHESION_MOLECULES_CAMS
26
0.095808
0.195608
0.805
KEGG_ALZHEIMERS_DISEASE
24
0.087302
0.183226
0.805
KEGG_PATHWAYS_IN_CANCER
48
0.098
0.185527
0.831
KEGG_AXON_GUIDANCE
17
0.11553
0.176978
0.834
KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION
24
0.136538
0.210733
0.893
KEGG_DILATED_CARDIOMYOPATHY
15
0.165339
0.237117
0.925
KEGG_NEUROTROPHIN_SIGNALING_PATHWAY
19
0.168932
0.240447
0.932
KEGG_MELANOGENESIS
15
0.252033
0.367091
0.99
KEGG_LYSOSOME
18
0.329389
0.436596
0.996
KEGG_CALCIUM_SIGNALING_PATHWAY
19
0.367886
0.427407
0.996
KEGG_WNT_SIGNALING_PATHWAY
24
0.361616
0.414545
0.996
KEGG_ENDOCYTOSIS
20
0.365503
0.423908
0.998
KEGG_ANTIGEN_PROCESSING_AND_PRESENTATION
15
0.419958
0.454951
0.999
KEGG_HUNTINGTONS_DISEASE
18
0.568465
0.60777
1
KEGG_REGULATION_OF_ACTIN_CYTOSKELETON
29
0.74269
0.769736
1
KEGG_PURINE_METABOLISM 20 0.933054 0.931545 1

NOM P nominal P value.