Table 1.
Gene | Nucleotide Position | Col-0 | C24 | A. lyrata | Mutation | Amino Acid Change | Classification |
---|---|---|---|---|---|---|---|
ATP5 | 39 | G | A | G | Transition: G:C → A:T in C24 | K → K | Synonymous |
ATP5 | 52 | A | T | T | Transversion: A:T → T:A in Col-0 | S → T | Nonsynonymous |
ATP5 | 375 | T | C | C | Transition: G:C → A:T in Col-0 | T → T | Synonymous |
ATP7 | 183 | T | C | C | Transition: G:C → A:T in Col-0 | P → P | Synonymous |
ATP7 | 504 | C | T | C | Transition: G:C → A:T in C24 | Y → Y | Synonymous |
COX5B-1 | 157 | T | C | C | Transition: G:C → A:T in Col-0 | L → L | Synonymous |
COX5B-1 | 158 | T | A | A | Transversion: A:T → T:A in Col-0 | Q → L | Nonsynonymous |
COX5B-1 | 178 | G | T | G | Transversion: G:C → A:T in C24 | D → Y | Nonsynonymous |
NDUF51 | 45 | A | T | T | Transversion: A:T → T:A in Col-0 | S → S | Synonymous |
NDUF51 | 198 | C | G | T | Unknown | ||
NDUF51 | 498 | C | T | T | Transition: A:T → G:C in Col-0 | H → H | Synonymous |
NDUF51 | 1437 | T | C | C | Transition: G:C → A:T in Col-0 | N → N | Synonymous |
NDUF51 | 1626 | T | C | C | Transition: G:C → A:T in Col-0 | V → V | Synonymous |
NDUF51 | 1769 | A | G | A | Transition: A:T → G:C in C24 | N → S | Nonsynonymous |
NDUF51 | 2125 | G | A | A | Transition: A:T → G:C in Col-0 | T → A | Nonsynonymous |
NDUF51 | 2154 | G | T | G | Transversion: G:C → A:T in C24 | V → V | Synonymous |
NDUFS8a | 95 | G | A | G | Transition: G:C → A:T in C24 | R → K | Nonsynonymous |
Note.—There were no differences between Col-0 and C24 for the genes ATP3, ATP15, ATP16, and NDUFA9.