Table 1.
AFLP | Recombination | v4 | v7.1 | 7p? | Portion Sex Linked |
---|---|---|---|---|---|
E33.M72.143 | 0 | 605:241571-241691 | 7:4966286-4966166 | Yes | 4435335-5175370 |
E33.M81.275 | 0 | 494:27646-27898 | No hits | — | NA |
E33.M90.327 | 0 | No hits | 211:76840-76535 | Yes | ALL |
E38.M93.218 | 0 | 953:138210-138402 | 278:109297-109490 | No | ALL |
No name | 0 | 494:31633-32115 | No hits | — | NA |
No name | 0 | 494:27541-27902 | No hits | — | NA |
No name | 0 | 379:817889-818000 | 2:149826489-149826600 | Yes | 149787496-150105127 |
No name | 0 | 736:292586-293067 | 78:248343-247864 | Yes | ALL |
No name | 0.3 | 605:245039-245621 | 7:4963243-4962661 | Yes | 4435335-5175370 |
No name | 0 | 605:116800-117215 | 22:1040592-1040177 | Yes | ALL |
E40.M52.572 | 0.4 | 859:57522-58049 | 7:3195527-3196069 | Yes | 76939-3370464 |
E33.M61.177 | 0.5 | 1778:6156-6312; 1778:9971-9815 | 144:136541-136385 | Yes | ALL |
E33.M61.177 | 0.5 | 1778:6156-6312; 1778:9971-9815 | 662:22621-22465 | No | NONE because 114 is on 7p |
No name | 0.5 | 810:261995-262744 | 94:264236-264985 | Yes | ALL |
No name | 0.5 | 810:261995-262744 | 94:263563-263460 | Yes | ALL |
E32.M94.406 | 1.9 | Multiple hits | 22:58856-59241 | Yes | ALL |
E37.M52.423 | 1.9 | 810:325559-325959 | 144:95531-95931 | Yes | ALL |
E37.M52.423 | 1.9 | 1151:130316-130719 | 144:95931-95531 | Yes | ALL |
E41.M83.506 | 1.9 | 810:276803-277288 | 94:279867-279382 | Yes | ALL |
E32.M35.552 | 2.6 | Multiple hits | No hits | — | NA |
E37.M60.232 | 2.6 | 6092: 2392-2601 | 7931:611-828 | Yes | ALL |
E32.M59.335 | 2.9 | 735:292141-292443 | 7:7903155-7902853 | Yes | 6687308-9940823 |
Note.—NA, not applicable. AFLP refers to the name of the AFLP from Olmstead et al. (2010) if provided. Recombination refers to the recombination rate with the sex-determining locus from that study. Scaffold and position of AFLPs are provided for genome assembly version 4.0 (v4) and 7.1 (v7.1). Sex-linked portions that were included in categories in tables 2 and 3 based on the level of recombination (Portion sex linked, with NA meaning not applicable) either refer to base pair positions of a contig within a larger scaffold that is not interrupted by unknown sequence or the entire scaffold was assumed to be sex linked (ALL).