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Alignment of portions of the flanking sequences of three hypermutated HERV-K elements at 15q25.2, Yq11.23a, and Yq11.23b. There is a 129-bp deletion in the sequence flanking the 3′ end of the element 15q25.2. The element Yq11.23a is on the negative DNA strand. The darker the color is at each position, the higher the similarity is between sequences. Black color indicates 100% identity. This image was generated using the Geneious software.
