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. 2013 Jun 22;14:418. doi: 10.1186/1471-2164-14-418

Table 1.

Summary of the results of the Markov models for selected codons

Algorithm
2-3 Markov model
5-3 Markov model
Codons % organisms with excessa Average log ratio Correlation value R value % organisms with excessa Average log ratio Correlation value R value
TGG
96
0.0011
0.003
0.58
96
0.0011
0.003
0.51
TGC
93
0.0009
0.002
0.45
93
0.0009
0.002
0.45
TGT
90
0.0008
0.002
0.31
90
0.0008
0.002
0.29
TGA
94
0.0008
0.002
0.46
93
0.0008
0.002
0.40
TAG
38
-0.0009
-0.009
-0.58
39
-0.0011
-0.012
-0.62
TAA
47
-0.0005
-0.007
-0.50
44
-0.0008
-0.010
-0.61
All Stop Codons 85 0.0005 0.001 0.31 83 0.0004 0.001 0.20

a Percent of the 1,976 organisms tested with excess of the codon off-frame.