Fig. 3.
CLUSTALW (Thompson et al. 1994) amino acid sequence alignment of translated PCR amplicons from BAC “haplo-typing” using a type II or b type III domain consensus primers (alignment provided by http://www.ebi.ac.uk.clustalw/). Amino acids encoded by PCR primers have been removed. The stop codon in two of the type III pseudogenes (#1 and #2) is indicated by asterisk; a type III sequence (#3), which contains a gap corresponding to 28 residues, also is potentially a pseu-dogene. Two type IV domains amplified by type III domain primers are represented by sequences 13 and 14 in (b)
