Table 4. The prediction of FGSG_06878 as a virulence factor with links to 8 seeds.
FGSG_06878 (probable CMK1 - Ca2+/calmodulin-dependent ser/thr protein kinase type I) is linked by | Seeds on which the prediction is based with phenotype [], and MIPS annotation.Phenotype symbols are rv = reduced virulence, lp = loss of pathogenicity | ||
Predicted PPI to: | FGSG_09903 (ste7) [lp], Probable map kinase kinase | FGSG_10313 [rv] (mgv1) (MGV1 map kinase) | FGSG_06385 (map1) [lp] (FMK1 pathogenicity map kinase 1 |
Co-expression to: | FGSG_08737 (GzOB031) [rv] Probable woronin body major protein precursor | FGSG_01964 (CHS5) [rv] Probable chitin synthase | FGSG_00385 (GzHMG002) [rv] probable NHP6B - nonhistone chromosomal protein |
Sequence similarity to: | FGSG_09897 (snf1) [rv] probable serine/threonine protein kinase | FGSG_06385 (map1) [lp] (FMK1 pathogenicity map kinase 1) | FGSG_16491 (fst11) [lp]] related to NRC-1 MAPKK kinase |
This prediction FGSG_06878 was confirmed to be a virulence protein in the recent paper of [21-Wang et al.]. Note that prediction FGSG_06878 is linked to seed FGSG_06385 by both predicted PPI and sequence similarity information. In planta phenotypes are rv, reduced virulence, a quantitative reduction in disease causing ability and the more stringent lp, indicating loss of pathogenicity where disease establishment is aborted.