Table 6. Funcat analysis of the verified virulence seeds and candidate virulence associated proteins.
The main functional categories | Seeds (%) | Candidates (%) | |
1 | metabolism | 9.9 | 7.6 |
2 | energy | 0.8 | 1.6 |
10 | cell cycle and dna processing | 4.3 | 7.1 |
11 | transcription | 9.1 | 4.4 |
12 | protein synthesis | 0.4 | 0.8 |
14 | protein fate (folding, modification, destination) | 4.0 | 11.2 |
16 | protein with binding function or cofactor requirement | 10.3 | 10.3 |
18 | regulation of metabolism and protein function | 4.0 | 4.4 |
20 | cellular transport, transport facilities and transport routes | 1.6 | 4.3 |
30 | cellular communication/signal transduction mechanism | 4.0 | 9.3 |
32 | cell rescue, defense and virulence | 1.6 | 4.5 |
34 | interaction with the environment | 3.2 | 3.7 |
36 | systemic interaction with the environment | 0.8 | 1.2 |
38 | transposable elements, viral and plasmid proteins | 0.0 | 0.1 |
40 | cell fate | 4.3 | 2.6 |
41 | development | 2.0 | 1.2 |
42 | biogenesis of cellular components | 3.2 | 4.4 |
43 | cell type differentiation | 6.7 | 4.2 |
45 | tissue differentiation | 0.4 | 0.3 |
47 | organ differentiation | 0.4 | 0.5 |
70 | Subcellular localization | 9.5 | 9.4 |
99 | unclassified proteins and others | 19.8 & | 6.9 |
recovered from forward genetic screens.