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. 2013 Jul 5;8(7):e68968. doi: 10.1371/journal.pone.0068968

Table 1. Characteristics of ChocNPV and ChroNPV genomes.

Baculoviruses*
Features Choc Chro Cf CfDEF Op Hycu Ac
Genome size (bp) 128,446 129,052 129,593 131,160 131,990 132,959 133,894
GC content (%) 50.1 48.6 50.1 50 55 45 40
No. of ORFs 148 149 146 149 152 148 155
No. of hrs 5 3 5 13 5 6 9
No. of bros 1 2 1 2 3 5 1
Mean % aa ID with Choc 77 97.3 70.1 76.7 75.4 56.2
Mean % aa ID with Chro 77 82.1 71.1 77.4 74.6 57.4
No. of homologs in Choc 144 144 134 133 128 131
No. of homologs in Chro 144 135 128 133 130 128
ORFs unique to Choc 2
ORFs unique to Chro 4
*

ChocNPV and ChroNPV homologs were compared with five alphabaculoviruses (CfMNPV, CfDEFMNPV, OpMNPV, HycuNPV, and AcMNPV). Amino acid identities were based on BLASTP homology search. Both ChocNPV and ChroNPV shared more ORFs with CfMNPV than with the other viruses. ChocNPV had a mean amino acid identity of 97.3% and ChroNPV 82.1% with CfMNPV.