Table 2.
Species | Locus | Gene product | Primers | Sequenced fragment size (bp) | Genotypes/site |
---|---|---|---|---|---|
C. dubliniensis | CdAAT1a | Aspartate aminotransferase | F: ATCAAACTACTAAATTTTTGAC | 373 | 1.25 |
R: CGGCAACATGATTAGCCC | |||||
CdACC1 | Acetyl-coenzyme A carboxylase | F: GCCAGAGAAATTTTGATCCAATGT | 407 | 1.33 | |
R: TTCATCAACATCATCCAAGTG | |||||
CdADP1 | ATP-dependent permease | F: GAGCCAAGTATGAATGACTTG | 443 | 1.2 | |
R: TTGATCAACAAACCCGATAAT | |||||
CdPMIb | Mannose phosphate isomerase | F: ACCAGAAATGGCC | 375 | 3.5 | |
R: GCAGCCATACATTCAATTAT | |||||
CdRPN2 | 26S proteasome regulatory subunit | F: TTTATGCATGCTGGTACTACTGATG | 302 | 1 | |
R: TAACCCCATACTCAAAGCAGCAGCCT | |||||
CdSYA1 | Alanyl-RNA synthetase | F: AGAAGAATAGTTGCTCTTACTG | 391 | 1 | |
R: GTTGCCCTTACCACCAGCTTT | |||||
CdVPS13 | Vacuolar protein sorting 13 | F: CGTTGAGAGATATTCGACTT | 403 | 1.33 | |
R: ACGGATCGATCGCCAATCC | |||||
CdZWF1b | Glucose-6-phosphate dehydrogenase | F: GTTTCATTTGATCCTGAAGC | 491 | 0.86 | |
R: GCCATTGATAAGTACCTGGAT | |||||
| |||||
C. glabrata | CgFKS | 1,3-β-glucan synthase | F: GTCAAATGCCACAACAACAACCT | 589 | 1.27 |
R: AGCACTTCAGCAGCGTCTTCAG | |||||
CgLEU2 | 3-Isopropylmalate dehydrogenase | F: TTTCTTGTATCCTCCCATTGTTCA | 512 | 1 | |
R: ATAGGTAAAGGTGGGTTGTGTTGC | |||||
CgNMT1 | Myristoyl-coenzyme A, protein N-myristoyltransferase | F: GCCGGTGTGGTGTTGCCTGCTC | 607 | 0.81 | |
R: CGTTACTGCGGTGCTCGGTGTCG | |||||
CgTRP1 | Phosphoribosyl-anthranilate isomerase | F: AATTGTTCCAGCGTTTTTGT | 419 | 1.08 | |
R: GACCAGTCCAGCTCTTTCAC | |||||
CgUGP1 | UTP-glucose-1-phosphate uridylyltransferase | F: TTTCAACACCGACAAGGACACAGA | 616 | 0.75 | |
R: TCGGACTTCACTAGCAGCAAATCA | |||||
CgURA3 | Orotidine-5′-phosphate decarboxylase | F: AGCGAATTGTTGAAGTTGGTTGA | 602 | 0.68 | |
R: AATTCGGTTGTAAGATGATGTTGC | |||||
| |||||
C. krusei | CkADE2 | Phosphoribosylaminoimidazole carboxylase | F: GTCACTTCTCAGTTTGAAGC | 470 | 2.33 |
R: ACACCATCTAAAGTAGAGCC | |||||
CkHIS3 | Imidazole glycerol phosphate dehydratase | F: GGAGGGGACATATCACTGCC | 400 | 1.75 | |
R: AATCTTTAATTGCCAAAGCC | |||||
CkLEU2 | 3-Isopropylmalate dehydrogenase | F: CTGTGAGACCAGAACAGGGG | 619 | 1.89 | |
R: GCAGAGCCACCCAAGTCTCC | |||||
CkLYS2 | L-Aminoadipate-semialdehyde dehydrogenase | F: ATCTGAGAAGCAGTTGGCGC | 441 | 1.90 | |
R: AGACTTGTAAGAATTATCCC | |||||
CkNMT1 | Myristoyl-coenzyme A, protein N-myristoyltransferase | F: CTGATGAAGAAATCACCG | 537 | 2.00 | |
R: GCTTGATATCATCTTTGTCC | |||||
CkTRP1 | Phosphoribosyl-anthranilate isomerase | F: AGCTATGTCGAGCAAAGAGG | 380 | 2.00 | |
R: ACATCAACGCCACAACACCC | |||||
| |||||
C. tropicalis | CtICL1 | Isocitrate lyase | F: CAACAGATTGGTTGCCATCAGAGC | 447 | 0.71 |
R: CGAAGTCATCAACAGCCAAAGCAG | |||||
CtMDR1 | Multidrug resistance protein | F: TGTTGGCATTCACCCTTCCT | 425 | 1.67 | |
R: TGGAGCACCAAACAATGGGA | |||||
CtSAPT2 | Secreted aspartic protease 2 | F: CAACGATCGTGGTGCTG | 525 | 0.51 | |
R: CACTGGTAGCTGAAGGAG | |||||
CtSAPT4 | Secreted aspartic protease 4 | F: TGCTTCTCCTACAACTTCACCTCC | 390 | 0.90 | |
R: ATTCCCATGACTCCCTGAGCAACA | |||||
CtXYR1 | D-xylose reductase I or II | F: AGTTGGTTTCGGATGTTG | 370 | 3.00 | |
R: TCGTAAATCAAAGCACCAGT | |||||
CtZWF1 | Glucose-6-phosphate dehydrogenase | F: GGTGCTTCAGGAGATTTAGC | 520 | 0.94 | |
R: ACCTTCAGTACCAAAAGCTTC |
F and R indicate forward and reverse primers, respectively. Genotypes/site indicate the ratio of genotypes to SNPs.