Skip to main content
. Author manuscript; available in PMC: 2013 Jul 7.
Published in final edited form as: J Struct Biol. 2011 Jul 26;176(1):97–111. doi: 10.1016/j.jsb.2011.07.011

Table 1.

Experimental restraints and structural statistics for final ensemble of 10 TgADF Structures

Distance Restraint List
classes TgADF
sequential 440
intra-residual 444
medium-range 275
long-range 359
Hydrogen bonds 47
Dihedral angle restrains (φ and φ) 192
RMSD values (Å) Ordered residuesa (Å)
All backbone atoms 0.9
All heavy atoms 1.3
Ramachandran plot statisticsa
Most favored region (%) 93.3
Allowed region (%) 6.6
Additionally allowed region (%) 0.1
Disallowed region (%) 0.0
CING ROG analysisb
Red 1 1%
Orange 15 19%
Green 65 80%
WHAT IF Summaryb
Structure Z-scores
1st generation packing quality −0.527 +/− 1.431
2nd generation packing quality 5.720 +/− 2.704
Ramachandran plot appearance −2.395 +/− 0.385
chi-1/chi-2 rotamer normality −3.131 +/− 0.713
Backbone conformation 0.368 +/− 1.639
RMS Z-scores
Bond lengths 1.039 +/− 0.002
Bond angles 0.290 +/− 0.009
Omega angle restraints 0.893 +/− 0.097
Side chain planarity 0.452 +/− 0.085
Improper dihedral distribution 0.457 +/− 0.018
Inside/Outside distribution 1.134 +/− 0.032
a

region, 2–51, 57–98, 100–108, 112–117

b

1–4, 7, 8, 10–13, 15–25, 27, 28, 30, 32, 33, 35–40, 42, 43, 46–50, 53–55, 58–59, 61, 62, 64–67, 69–75, 77–79, 83–89, 93–97, 104–108, 111–113, 118