Table 2. HKA test for the TL gene arrangement.
Gene | TL |
Dpse vs. D mir |
||
---|---|---|---|---|
S Obs | S Exp | D Obs | D Exp | |
pSTPP | 2 | 2.67 | 5.28 | 4.61 |
en | 9 | 5.35 | 3.28 | 6.93 |
pHYSC | 11 | 7.21 | 8.68 | 12.47 |
exu1 | 2 | 1.29 | 0.96 | 1.67 |
pSTAR | 10 | 12.05 | 22.87 | 20.83 |
pHYST | 21 | 15.40 | 21.03 | 26.63 |
dSTPP | 0 | 3.58 | 9.77 | 6.19 |
dSCTL | 8 | 7.98 | 13.77 | 13.79 |
eve | 0 | 1.99 | 4.58 | 2.58 |
Mef2 | 12 | 10.52 | 12.12 | 13.60 |
Amy1 | 13 | 9.44 | 8.66 | 12.22 |
pSCCH | 0 | 5.02 | 13.71 | 8.68 |
dSTAR | 33 | 22.79 | 19.28 | 29.49 |
dSCCH | 2 | 2.11 | 3.77 | 3.66 |
F6 | 5 | 7.72 | 12.70 | 9.99 |
dHYSC | 7 | 6.77 | 11.48 | 11.71 |
dHYST | 0 | 12.67 | 34.56 | 21.90 |
EcR | 2 | 2.43 | 3.57 | 3.14 |
T | 2.17 | |||
χ2 | 20.91 | |||
P | 0.047 | |||
Sim | 9097 |
HKA, Hudson Kreitman, and Aguade; TL, Tree Line; S Obs, observed number of segregating sites; S Exp, expected number of segregating sites; D Obs, observed number of divergent sites; D Exp, expected number of divergent sites; T, Coalescence time between D. pseudoobscura and D. miranda; χ2, HKA test statistic; P, probability of a χ2 statistic greater than that the observed value; Sim, number of coalescent simulations run.