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. 2013 Jul 1;3(7):1151–1163. doi: 10.1534/g3.113.006122

Table 2. HKA test for the TL gene arrangement.

Gene TL
Dpse vs. D mir
S Obs S Exp D Obs D Exp
pSTPP 2 2.67 5.28 4.61
en 9 5.35 3.28 6.93
pHYSC 11 7.21 8.68 12.47
exu1 2 1.29 0.96 1.67
pSTAR 10 12.05 22.87 20.83
pHYST 21 15.40 21.03 26.63
dSTPP 0 3.58 9.77 6.19
dSCTL 8 7.98 13.77 13.79
eve 0 1.99 4.58 2.58
Mef2 12 10.52 12.12 13.60
Amy1 13 9.44 8.66 12.22
pSCCH 0 5.02 13.71 8.68
dSTAR 33 22.79 19.28 29.49
dSCCH 2 2.11 3.77 3.66
F6 5 7.72 12.70 9.99
dHYSC 7 6.77 11.48 11.71
dHYST 0 12.67 34.56 21.90
EcR 2 2.43 3.57 3.14
T 2.17
χ2 20.91
P 0.047
Sim 9097

HKA, Hudson Kreitman, and Aguade; TL, Tree Line; S Obs, observed number of segregating sites; S Exp, expected number of segregating sites; D Obs, observed number of divergent sites; D Exp, expected number of divergent sites; T, Coalescence time between D. pseudoobscura and D. miranda; χ2, HKA test statistic; P, probability of a χ2 statistic greater than that the observed value; Sim, number of coalescent simulations run.