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. 2013 Jul 8;8(7):e67423. doi: 10.1371/journal.pone.0067423

Table 4. Some new miRNAs located in the introns or exons of protein-coding genes.

New miRNA name Genomic_locus Position of new miRNA located on corresponding gene gene function
novel-soy0014 Gm19∶36915900∶36915999:+ Glyma19g29360.1_intr10 Predicted ATPase (PP-loop superfamily)
novel-soy0017 Gm10∶50870523∶50870801:− Glyma10g44540.1_intr6 Starch binding domain
novel-soy0018 Gm13∶41358349∶41358450:+ Glyma13g40930.2_intr2 RRM motif-containing protein
novel-soy0027 Gm13∶35514890∶35515064:+ Glyma13g33830.1_intr3 Hydroxyindole-O-methyltransferase and related SAM-dependent methyltransferases
novel-soy0028 Gm02∶42141386∶42141490:+ Glyma02g36710.1_intr3 translation initiation factor IF-3
novel-soy0029 Gm03∶45559347∶45559504:− Glyma03g39500.1_intr2 26S proteasome regulatory complex, ATPase RPT5
novel-soy0030 Gm08∶41436001∶41436101:− Glyma08g41460.2_intr2 serine–glyoxylate transaminase
novel-soy0031 Gm08∶4270886∶4271063:− Glyma08g06010.1_intr8 Thioredoxin
novel-soy0033 Gm18∶13659100∶13659200:+ Glyma18g14150.1_intr3 unknown
novel-soy0034 Gm10∶48411098∶48411434:− Glyma10g41290.1_intr1 Predicted signal transduction protein,PCD6 interacting protein-related
novel-soy0035 Gm14∶26871028∶26871361:+ Glyma14g22750.1_intr3 unknown
novel-soy0036 Gm08∶46321055∶46321233:− Glyma08g47470.2_intr3 Activator of Hsp90 ATPase
novel-soy0037 Gm14∶33572225∶33572417:− Glyma14g27380.1_intr9 unknown
novel-soy0038 Gm17∶14170511∶14170612:− Glyma17g17360.1_intr1 NADH:ubiquinone oxidoreductase, NDUFS4/18 kDa subunit
novel-soy0039 Gm20∶2071915∶2072036:+ Glyma20g02450.1_intr1 unknown
novel-soy0040 Gm11∶33167338∶33167491:+ Glyma11g31810.1_intr4 Hsp70-interacting protein
novel-soy0041 Gm16∶29006145∶29006227:+ Glyma16g25080.1_intr1 Leucine Rich Repeat PROTEIN
novel-soy0042 Gm06∶44529277∶44529430:− Glyma06g41240.1_exon3 Apoptotic ATPase,Leucine Rich Repeat
novel-soy0045 Gm18∶61442586∶61442692:− Glyma18g53060.1_exon1 unknown
novel-soy0050a Gm20∶39792640∶39792742:− Glyma20g31140.3_intr7 unknown
novel-soy0050b Gm10∶893455∶893562:+ Glyma10g01210.1_intr2 SBP domain
novel-soy0050c Gm11∶36844937∶36845041:− Glyma11g35100.1_intr5 Arginyl-tRNA-protein transferase
novel-soy0050d Gm13∶37718475∶37718554:+ Glyma13g36430.1_intr2 Ypt/Rab-specific GTPase-activating protein GYP7 and related proteins
novel-soy0051a Gm13∶38887195∶38887345:+ Glyma13g37960.2_intr1 Universal stress protein family
novel-soy0051b Gm09∶109565∶109722:− Glyma09g00360.1_intr2 RhoGAP domain
novel-soy0052a Gm05∶40112962∶40113078:+ Glyma05g36260.1_intr14 Protease family M24(methionyl aminopeptidase,aminopeptidase P)
novel-soy0052b Gm05∶15006208∶15006324:− Glyma05g14210.1_intr8 DNA double-strand break repair RAD50 ATPase
novel-soy0053a Gm03∶44205908∶44206007:+ Glyma03g37670.1_intr3 DNA-directed RNA polymerase subunit E
novel-soy0053b Gm19∶46707950∶46708048:+ Glyma19g40280.2_intr3 DNA-directed RNA polymerase subunit E
novel-soy0053c Gm19∶5268050∶5268406:+ Glyma19g05020.1_intr5 ATP sulfurylase (sulfate adenylyltransferase)
novel-soy0053d Gm20∶44946295∶44946393:− Glyma20g36970.1_intr24 Myosin class V heavy chain
novel-soy0053e Gm08∶34672874∶34672969:− Glyma08g36580.1_intr5 unknown
novel-soy0053f Gm05∶29437141∶29437234:− Glyma05g23710.2_intr4 LSD1 zinc finger
novel-soy0053g Gm20∶818958∶819056:− Glyma20g01180.2_intr12 acetyl-CoA acyltransferase
novel-soy0053h Gm02∶5732006∶5732122:+ Glyma02g07190.1_intr1 DHHC-type Zn-finger proteins
novel-soy0053i Gm19∶45160636∶45160733:+ Glyma19g38180.1_intr2 Predicted alpha/beta hydrolase
novel-soy0053j Gm08∶5615228∶5615326:− Glyma08g07840.1_intr1 COPII vesicle protein