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. 2013 Mar 12;5(3):824–833. doi: 10.3390/v5030824

Figure 1.

Figure 1

Fragment Merger Input Page. Each input file (chromatogram or FASTA file) is specified in the order in which the merge is to be performed. Trimming parameters can be specified for each chromatogram. Selecting the “Rev” or “Comp” check-boxes will reverse or complement the sequence data, respectively. Two input boxes specify the thresholds for considering a fragment as “short” and for triggering a warning for potentially poor quality chromatograms. Sliding parameters and a reference sequence file (in FASTA format) can be specified.