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. 2013 Jun 18;13:138. doi: 10.1186/1471-2180-13-138

Table 1.

List of the alleles and sequence type, origin of the sample, antibiotic pattern and number of patient for each isolate

Isolates Patient Sample origina STs acsA aroE guaA mutL nuoD ppsA trpE Antibiotic patternb
PaC1
 1
 W
 ST-1138*
 5
 3
 79
 5
 1
 7
 47
 XDR
PaC49
 1
 RS
 ST-1191*
 45
 148*
 15
 35
 53
 106*
 3
 MDR
PaC51
 1
 RS
 ST-1147*
 17
 3
 5
 3
 1
 6
 26
 non-MDR
PaC52
 1
 W
 ST-1138*
 5
 3
 79
 5
 1
 7
 47
 XDR
PaC2
 2
 W
 ST-175
 28
 22
 5
 3
 3
 14
 19
 XDR
PaC3
 3
 R
 ST-235
 38
 11
 3
 13
 1
 2
 4
 non-MDR
PaC4
 4
 R
 ST-800
 17
 22
 11
 3
 3
 15
 3
 non-MDR
PaC5
 5
 W
 ST-108
 39
 5
 20
 5
 1
 6
 31
 XDR
PaC7
 6
 R
 New-1
 28
 5
 36
 -
 3
 13
 7
 MDR
PaC16
 6
 R
 New-2
 28
 5
 20
 -
 3
 13
 7
 MDR
PaC9
 7
 U
 ST-274
 23
 5
 11
 7
 1
 12
 7
 XDR
PaC10
 8
 U
 ST-1139*
 28
 22
 20
 3
 3
 14
 19
 XDR
PaC19
 8
 U
 ST-175
 28
 22
 5
 3
 3
 14
 19
 XDR
PaC32
 8
 RS
 ST-175
 28
 22
 5
 3
 3
 14
 19
 XDR
PaC40
 8
 R
 ST-175
 28
 22
 5
 3
 3
 14
 19
 XDR
PaC11
 9
 U
 ST-235
 38
 11
 3
 13
 1
 2
 4
 XDR
PaC24
 9
 U
 ST-235
 38
 11
 3
 13
 1
 2
 4
 XDR
PaC12
 10
 R
 ST-1140*
 38
 11
 20
 13
 1
 2
 4
 XDR
PaC14
 11
 R
 ST-1141*
 113
 4
 5
 67
 1
 17
 26
 non-MDR
PaC15
 12
 R
 ST-1142*
 35
 11
 112
 16
 1
 6
 42
 MDR
PaC17
 13
 R
 ST-1186*
 39
 5
 20
 59*
 1
 20
 15
 non-MDR
PaC18a
 14
 U
 ST-1143*
 8
 5
 9
 3
 1
 4
 9
 non-MDR
PaC18b
 14
 U
 ST-1143*
 8
 5
 9
 3
 1
 4
 9
 non-MDR
PaC20
 15
 U
 ST-1144*
 39
 10
 1
 3
 4
 6
 7
 non-MDR
PaC21
 16
 R
 ST-175
 28
 22
 5
 3
 3
 14
 19
 XDR
PaC23
 17
 U
 ST-1187*
 35
 22
 5
 3
 1
 104*
 4
 non-MDR
PaC25a
 18
 U
 ST-207
 47
 4
 5
 33
 1
 6
 40
 non-MDR
PaC25b
 18
 U
 ST-207
 47
 4
 5
 33
 1
 6
 40
 non-MDR
PaC26
 19
 R
 ST-235
 38
 11
 3
 13
 1
 2
 4
 XDR
PaC27
 20
 R
 ST-274
 23
 5
 11
 7
 1
 12
 7
 non-MDR
PaC28
 21
 U
 ST-1188*
 69*
 147*
 5
 11
 2
 15
 2
 MDR
PaC29
 22
 R
 ST-1145*
 15
 5
 1
 1
 1
 12
 1
 non-MDR
PaC30
 23
 PS
 ST-244
 17
 5
 12
 3
 14
 4
 7
 non-MDR
PaC31
 24
 U
 ST-499
 11
 5
 7
 27
 2
 7
 33
 MDR
PaC33
 25
 R
 ST-175
 28
 22
 5
 3
 3
 14
 19
 XDR
PaC34
 26
 R
 ST-179
 36
 27
 28
 3
 4
 13
 7
 MDR
PaC35
 27
 U
 ST-235
 38
 11
 3
 13
 1
 2
 4
 MDR
PaC36a
 28
 R
 ST-175
 28
 22
 5
 3
 3
 14
 19
 XDR
PaC36b
 28
 R
 ST-175
 28
 22
 5
 3
 3
 14
 19
 MDR
PaC37
 29
 B
 ST-175
 28
 22
 5
 3
 3
 14
 19
 XDR
PaC38
 29
 B
 ST-175
 28
 22
 5
 3
 3
 14
 19
 XDR
PaC39
 30
 U
 ST-508
 15
 5
 11
 3
 2
 4
 3
 non-MDR
PaC41
 31
 U
 ST-1189*
 72*
 5
 11
 72
 3
 105*
 3
 non-MDR
PaC42
 32
 W
 ST-253
 4
 4
 16
 12
 1
 6
 3
 MDR
PaC56
 32
 B
 ST-253
 4
 4
 16
 12
 1
 6
 3
 MDR
PaC43
 33
 R
 ST-235
 38
 11
 3
 13
 1
 2
 4
 XDR
PaC44
 34
 U
 ST-316
 13
 8
 9
 3
 1
 6
 9
 non-MDR
PaC45
 35
 U
 ST-175
 28
 22
 5
 3
 3
 14
 19
 XDR
PaC46
 36
 R
 ST-1190*
 45
 148*
 15
 35
 53
 106*
 19
 MDR
PaC47
 37
 R
 ST-175
 28
 22
 5
 3
 3
 14
 19
 XDR
PaC48
 38
 R
 ST-253
 4
 4
 16
 12
 1
 6
 3
 non-MDR
PaC54
 38
 R
 ST-253
 4
 4
 16
 12
 1
 6
 3
 non-MDR
PaC50
 39
 US
 ST-1146*
 5
 11
 57
 33
 1
 6
 3
 non-MDR
PaC53
 40
 U
 ST-1148*
 16
 5
 12
 3
 2
 1
 18
 non-MDR
PaC55
 41
 R
 ST-179
 36
 27
 28
 3
 4
 13
 7
 non-MDR
PaC57 42 R ST-1149* 18 11 57 5 1 20 26 non-MDR

Asterisk mark (*) indicates the new alleles, new alleles combinations, and new sequence types described in this study. -, gene not amplified/sequenced.

aSample origin: blood (B), wound (W), urine (U), respiratory (R), rectal smear (RS), urethral smear (US), prepuce smear (PS).

bThe isolates were classified according to the resistance pattern, as multidrug-resistant (MDR, non-susceptible to ≥1 agent in ≥3 antibiotic categories), extensively drug-resistant (XDR, non-susceptible to ≥ 1 agent in all but ≤2 antibiotic categories) and non-multidrug resistant (non-MDR).