Table 1. COG distribution of carbonylated proteins identified following biotin labeling.
COG categories | UVB | DARK | |||
Nb of prot. | % of prot | Nb of prot. | % of prot | ||
[COG J] | Translation, ribosomal structure and biogenesis | 47 | 33 | 22 | 39 |
[COG K] | Transcription | 5 | 3 | 2 | 4 |
[COG L] | Replication, recombination and repair | 5 | 3 | 2 | 4 |
[COG D] | Cell cycle control, cell division, chromosome partitioning | 1 | 1 | 0 | 0 |
[COG T] | Signal transduction mechanisms | 4 | 3 | 3 | 5 |
[COG M] | Cell wall/membrane/envelope biogenesis | 7 | 5 | 3 | 5 |
[COG N] | Cell motility | 2 | 1 | 1 | 2 |
[COG U] | Intracellular trafficking, secretion, and vesicular transport | 4 | 3 | 0 | 0 |
[COG O] | Posttranslational modification, protein turnover, chaperones | 14 | 10 | 5 | 9 |
[COG C] | Energy production and conversion | 7 | 5 | 0 | 0 |
[COG G] | Carbohydrate transport and metabolism | 7 | 5 | 3 | 5 |
[COG E] | Amino acid transport and metabolism | 7 | 5 | 6 | 11 |
[COG F] | Nucleotide transport and metabolism | 1 | 1 | 0 | 0 |
[COG H] | Coenzyme transport and metabolism | 3 | 2 | 0 | 0 |
[COG I] | Lipid transport and metabolism | 6 | 4 | 1 | 2 |
[COG P] | Inorganic ion transport and metabolism | 5 | 3 | 1 | 2 |
[COG Q] | Secondary metabolites biosynthesis, transport and catabolism | 3 | 2 | 1 | 2 |
[COG R] | General function prediction only | 6 | 4 | 3 | 5 |
[COG S] | Function unknown | 9 | 6 | 4 | 7 |
Numbers indicate the number of proteins in each COG category.