Table 2. Primer pairs used for quantitative real-time PCR.
Gene name (Abbreviation) | Accession No. | Primer Namea | Sequence (5′-3′) | Product length (bp) | Tm (°C) | Primer efficiency (%) | R2 b |
Elongation factor-1 | DQ192234 | SlN-F1 | CTCCTACATCAAGAAGATC | 295 | 55 | 96.7 | 0.997 |
(EF1) | SlN-R1 | CTTGAGGATACCAGTTTC | 55 | ||||
Ribosomal protein L10 | KC866373 | SlN-F2 | GACTTGGGTAAGAAGAAG | 189 | 55 | 109.7 | 0.998 |
(RPL10) | SlN-R2 | GATGACATGGAATGGATG | 55 | ||||
Actin | DQ494753 | SlN-F3 | GATCATGTTTGAGACCTT | 214 | 55 | 107.3 | 0.998 |
(ACTB) | SlN-R3 | GATCTTCATGAGGTAGTC | 55 | ||||
Glyceraldehyde-3-phosphate dehydrogenase | HQ012003 | SlN-F4 | GGGTATTCTTGACTACAC | 184 | 55 | 109.6 | 0.996 |
(GAPDH) | SlN-R4 | CTGGATGTACTTGATGAG | 55 | ||||
Beta FTZ-F1 | HQ260326 | SlN-F5 | CTGATGAGACTACACTTC | 297 | 55 | 107.9 | 0.998 |
(FTZF1) | SlN-R5 | CAGGAACTACCATTACTAG | 55 | ||||
Ubiquinol-cytochrome c reductase | HQ599193 | SlN-F6 | GCCAAGATTGAGATCAAG | 204 | 55 | 109.7 | 0.998 |
(UCCR) | SlN-R6 | GCATACTCCGATAACTAC | 55 | ||||
Ribosomal protein S3 | KC866374 | SlN-F7 | CGGAGATCATCATTATGG | 191 | 55 | 105.6 | 0.997 |
(RPS3) | SlN-R7 | GAGTTTGTATCTGAGAGAC | 55 | ||||
Arginine kinase | HQ840714 | SlAK-F | CTGAAGAAGTACCTTACC | 80 | 55 | 105.2 | 0.989 |
(AK) | SlAK-R | CAATCCAGCAGAGTTGAG | 55 |
F and R refer to forward and reverse primers, respectively;
R 2 refers to the coefficient of determination.