Table 2.
Gene Name or Chromosomal Location | Gene Symbola | Fold Change Between LH Response of aGCs vs mGCs | P Value | LH Regulated in aGCs fdr < 0.01 | LH Regulated in mGCs fdr < 0.01 | HSI − Mean RMA Hybridization Value Before LH |
HSI − Mean RMA Hybridization Value After LH |
||
---|---|---|---|---|---|---|---|---|---|
aGC | mGC | aGC | mGC | ||||||
Nidogen 2 | NID2 | 16.52 | .002 | Yes | Yes | 23 | 558 | 3616 | 5224 |
Similar to Collagen α-1(XIV) chain precursor | LOC781493 | 8.91 | .001 | Yes | No | 14 | 138 | 371 | 417 |
Caveolin 1 | CAV1 | 7.54 | .001 | Yes | Yes | 16 | 75 | 6548 | 6235 |
Fibronectin 1 | FN1 | 5.10 | .002 | Yes | No | 89 | 744 | 1200 | 1978 |
Claudin 11 | CLDN11 | 4.91 | .011 | Yes | Yes | 12 | 57 | 3518 | 3409 |
Dickkopf homolog 3 | DKK3 | 4.77 | .001 | Yes | Yes | 15 | 92 | 2273 | 2952 |
Collagen, type V, α 2 | COL5A2 | 3.82 | .029 | Yes | No | 15 | 256 | 215 | 956 |
CART prepropeptide | CARTPT | 3.68 | .001 | No | Yes | 45 | 155 | 46 | 43 |
Chr2:110382-336-110382643(−) | (IGFBP5) | 3.67 | .033 | Yes | No | 71 | 540 | 573 | 1181 |
Dihydropyrimidinase-like 3 | DPYSL3 | 3.56 | .001 | Yes | YES | 21 | 81 | 252 | 277 |
ρ family GTPase 3 | RND3 | 3.55 | .001 | Yes | Yes | 29 | 93 | 4046 | 3710 |
ADAM metallopeptidase with thrombospondin type 1 motif; 1 | ADAMTS1 | 3.34 | .001 | Yes | Yes | 45 | 184 | 1272 | 1569 |
Chromosome 8 open reading frame 4 | C27H8orf4 | 3.32 | .025 | Yes | Yes | 11 | 37 | 654 | 662 |
Cyclin D2 | CCND2 | −3.01 | .002 | Yes | Yes | 5297 | 3993 | 64 | 146 |
SPARC-related modular calcium binding 2 | SMOC2 | −3.02 | .015 | Yes | No | 942 | 717 | 192 | 442 |
Hydroxysteroid (17-β) dehydrogenase 1 | HSD17B1 | −3.05 | .010 | Yes | Yes | 2452 | 1039 | 49 | 62 |
Heme oxygenase 1 | HMOX1 | −3.07 | .033 | Yes | No | 367 | 218 | 90 | 164 |
NADH dehydrogenase (ubiquinone) 1 α subcomplex; 4-like 2 | NDUFA4L2 | −3.10 | .005 | Yes | No | 62 | 21 | 20 | 22 |
6-Phosphofructo-2-kinase/fructose-2;6-biphosphatase 3 | PFKFB3 | −3.28 | .011 | No | Yes | 283 | 95 | 504 | 556 |
Chromosome 12 open reading frame 32 | C5H12orf32 | −3.35 | .002 | Yes | No | 226 | 236 | 32 | 113 |
CD14 molecule | CD14 | −3.39 | .048 | No | Yes | 77 | 20 | 146 | 130 |
Neural precursor cell expressed; developmentally down-regulated 9 | NEDD9 | −3.41 | .032 | Yes | No | 130 | 118 | 21 | 65 |
KIAA0101 protein (PCNA-assoc factor) | KIAA0101 | −3.45 | .018 | Yes | Yes | 1782 | 1439 | 45 | 126 |
SAM and SH3 domain containing 1 | SASH1 | −3.51 | .028 | Yes | No | 105 | 65 | 16 | 35 |
chr2:88862297–88862784 (−) | (Ankrd44) | −4.04 | .009 | Yes | No | 405 | 163 | 70 | 114 |
chr11:16969669-16970066 (+) | — | −4.26 | .006 | Yes | Yes | 701 | 267 | 27 | 43 |
Complement component 1; s subcomponent | C1S | −5.63 | .005 | No | Yes | 20 | 41 | 18 | 210 |
Guanylate cyclase activator 1A (retina) | GUCA1A | −6.07 | .008 | Yes | No | 485 | 97 | 21 | 25 |
chr1:73033634-73034079 (+) | — | −8.03 | .003 | No | Yes | 19 | 200 | 102 | 1737 |
Gene symbols enclosed in parentheses are probe sets that recognize transcripts with high homology to a named gene in another species.
Chromosomal locations are based on the Cow October 2011 assembly. Dashes reflect negative or down regulated gene.