Table II. Comparison of common protein assignments from mice and rat.
Note that there are three proteins that were not classified as lysosomal in the original analysis of rat tissues (Il4i1, Ctso, and Scpep1 (3)) that we now consider to be validated lysosomal proteins. Data were filtered for proteins with total spectral counts of ≥20.
| Classification | Specificity, mouse | Specificity, rat |
||
|---|---|---|---|---|
| Enriched | Ambiguous | Depleted | ||
| Known | Enriched | 62 | 1 | 0 |
| Man6P | Depleted | 0 | 0 | 1 |
| Other | Enriched | 41 | 5 | 7 |
| Ambiguous | 4 | 2 | 7 | |
| Depleted | 1 | 10 | 68 | |