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. 2013 Mar 29;12(7):1865–1880. doi: 10.1074/mcp.M112.023085

Table I. Functional classification of the significantly altered proteins from CacyBP-OE data set. These proteins have met the criteria (i.e., unused protein score > 1.3 and change in expression level of at least 1.44-fold for HCT116-CacyBP OE vs. HCT116-Control cell) as defined in the “materials and method” as well as “results” section.

Unused Protein score % Sequence Coverage Accession Number Name Species Peptides (95%) Expression pattern iTRAQ Ratio (Mean± S.E.)
Proteins involved in cellular proliferation
    4.31 45.2 IPI00946824.1 FXN Uncharacterized protein 9606 2 0.43 ± 0.05
    12.51 22.1 IPI00795482.1 STAT1 83 kDa protein 9606 8 2.44 ± 0.32
Proteins involved in cell Migration
    23.1 17.1 IPI00215995.1 Isoform 1 of Integrin alpha-3 9606 18 1.49 ± 0.18
    14.86 23.9 IPI00921401.1 Isoform 9 of Integrin alpha-6 9606 11 2.56 ± 0.04
    10.99 24 IPI00555991.2 Isoform 2 of Integrin alpha-V 9606 9 1.89 ± 0.15
    48.23 35.1 IPI00220847.2 Isoform Beta-4D of Integrin beta-4 9606 34 1.47 ± 0.03
    10 37.8 IPI00719669.4 Myosin regulatory light chain MRCL2 9606 5 1.52 ± 0.1
    4.07 41.6 IPI00032313.1 S100A4 Protein 9606 2 2.63 ± 0.2
    12 73.2 IPI00297714.2 Gamma-synuclein 9606 9 2.32 ± 0.08
    12.51 22.1 IPI00795482.1 STAT1 83 kDa protein 9606 8 2.45 ± 0.32
    4 15.4 IPI00219301.7 Myristoylated alanine-rich C-kinase substrate 9606 2 43.71 ± 21.65
    22.22 76.3 IPI00219219.3 Galectin-1 9606 33 0.62 ± 0.01
Proteins involved in cellular invasion
    4 5.8 IPI01014165.1 COL18A1 Uncharacterized protein 9606 2 1.83 ± 0.04
    10.99 24 IPI00555991.2 Isoform 2 of Integrin alpha-V 9606 9 1.89 ± 0.15
    48.23 35.1 IPI00220847.2 Isoform Beta-4D of Integrin beta-4 9606 34 1.47 ± 0.03
    4 15.4 IPI00219301.7 Myristoylated alanine-rich C-kinase substrate 9606 2 43.71 ± 21.65
    16.4 49.1 IPI00647915.1 TAGLN2 24 kDa protein 9606 13 1.73 ± 0.10
    6.11 55.3 IPI01021488.1 CBX5, 22 kDa protein 9606 5 0.54 ± 0.1
Proteins engaged in cellular adhesion
    12.14 25.6 IPI00395605.4 ARHGEF1 Isoform 3 of Rho guanine nucleotide exchange factor 1 9606 7 0.65 ± 0.07
    11.89 29.5 IPI00301058.5 VASP Vasodilator-stimulated phosphoprotein 9606 11 0.59 ± 0.02
Proteins involved in caveolar mediated endocytosis
    23.1 17.1 IPI00215995.1 Isoform 1 of Integrin alpha-3 9606 18 1.49 ± 0.18
    14.86 23.9 IPI00921401.1 Isoform 9 of Integrin alpha-6 9606 11 2.56 ± 0.04
    10.99 24 IPI00555991.2 Isoform 2 of Integrin alpha-V 9606 9 1.89 ± 0.15
    48.23 35.1 IPI00220847.2 Isoform Beta-4D of Integrin beta-4 9606 34 1.47 ± 0.03
Proteins involved in ARP-WASP mediated actin nucleation
    23.1 17.1 IPI00215995.1 Isoform 1 of Integrin alpha-3 9606 18 1.49 ± 0.18