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. 2013 Apr 9;12(7):1926–1938. doi: 10.1074/mcp.M112.024638

Table II. Detailed composition and statistical parameters of the top enriched GO terms.

Term Count p valuea Protein name Fold Enrichmentb Benjaminic
Anti-apoptosis (GO:0006916) 6 1,7E-05 dAnnexin A4, Glutathione S-transferase P, Thioredoxin domain-containing protein 5, 78 kDa glucose-regulated protein, Peroxiredoxin-2, Stress-70 protein, mitochondrial 17,13 0,0078
Negative regulation of apoptosis (GO:0043066) 6 2,2E-04 9,97 0,0499
Negative regulation of programmed cell death (GO:0043069) 6 2,4E-04 9,83 0,0358
Negative regulation of cell death (GO:0060548) 6 2,4E-04 9,80 0,0273
Negative regulation of cellular process (GO:0048523) 10 7,4E-04 Prohibitin, Gelsolin, Proteasome subunit alpha type-1, Proteasome subunit alpha type-1, Glutathione S-transferase P, Thioredoxin domain-containing protein 5, 78 kDa glucose-regulated protein, Peroxiredoxin-2, Proteasome subunit beta type-3, Stress-70 protein, mitochondrial 3,54 0,0652
Hydrogen peroxide metabolic process (GO:0042743) 3 7,4E-04 Peroxiredoxin-6, Peroxiredoxin-2, Protein DJ-1 70,58 0,0553
Response to stress (GO:0006950) 10 8,2E-04 Peroxiredoxin-6, Heat shock 70 kDa protein 4, Ubiquitincarboxyl-terminal hydrolaseisozyme L1, Heat shock cognate 71 kDa protein, Chlorideintracellularchannelprotein 1, Gelsolin, 78 kDa glucose-regulatedprotein, Peroxiredoxin-2, Stress-70 protein, mitochondrial, Protein DJ-1 3,49 0,0523
Negative regulation of biological process (GO:0048519) 10 1,4E-03 Prohibitin, Gelsolin, Proteasome subunit alpha type-1, Annexin A4, Glutathione S-transferase P, Thioredoxin domain-containing protein 5, 78 kDa glucose-regulated protein, Peroxiredoxin-2, Proteasome subunit beta type-3, Stress-70 protein, mitochondrial 3,25 0,0768
Regulation of apoptosis (GO:0042981) 7 1,5E-03 *Prohibitin, Annexin A4, Glutathione S-transferase P, Thioredoxin domain-containing protein 5, 78 kDa glucose-regulated protein, Peroxiredoxin-2, Stress-70 protein, mitochondrial 5,12 0,0719
Regulation of programmed cell death (GO:0043067) 7 1,5E-03 5,07 0,0683
Regulation of cell death (GO:0010941) 7 1,6E-03 5,05 0,0634

a p value with a modified Fisher exact test was used to select the top enriched categories.

b Fold enrichment indicates the magnitude of enrichment.

c Benjamini multiple testing was performed to globally correct the p value controlling family-wide false discovery rate (π value ≤ 0.1).

d These proteins are the same for all GO terms of the corresponding columns.