Table 2.
Protein name | Helice | Length of transmembrane regions of deduced amino acid sequence*
|
|||||
1 | 2 | 3 | 4 | 5 | 6 | ||
CpPIP1 | Inside to outside | 59–76 | 86–105 | 133–154 | 178–194 | 210–235 | 259–279 |
Outside to inside | 54–74 | 88–105 | 133–151 | 178–194 | 208–226 | 259–277 | |
CpPIP2 | Inside to outside | 43–65 | 82–99 | 128–149 | 170–189 | 205–277 | 252–269 |
Outside to inside | 43–63 | 80–98 | 128–146 | 170–186 | 203–221 | 252–269 |
Available at http://www.cbs.dtu.dk/services/TMHMM-2.0/
The length of various helices of transmembrane regions is indicated by the number of the amino acids in the deduced polypeptides of CpPIP1 and CpPIP2 by taking starting methionine as 1