Table 1. Ligand-channel energy (E, kcal/mol) and top contributions to ita.
State | Ligand | K ions | E | K+ | F103 | T75 | T74 | I100 |
---|---|---|---|---|---|---|---|---|
Open |
Lidocaine |
S1/S3 |
−23.4 |
0.37 |
−8.20 |
−4.15 |
−0.73 |
−2.52 |
S2/S4 |
−15.1 |
2.42 |
−6.25 |
−1.61 |
−0.11 |
−2.12 |
||
Tetracaine |
S1/S3 |
−20.6b |
0.74 |
−2.02 |
−1.36 |
−0.72 |
−1.09 |
|
S2/S4 |
−13.4c |
6.72 |
−9.17 |
−2.03 |
0.17 |
−0.75 |
||
Open- inactivated |
Lidocaine |
S1/S4 |
−17.5 |
0.58 |
−1.38 |
−6.64 |
−0.22 |
−2.17 |
Tetracaine |
S1/S4 |
−20.2 |
−0.38 |
−1.97 |
−2.99 |
−0.01 |
−2.57 |
|
Closed | Lidocaine |
S2/S4 |
−19.4d |
0.62 |
−2.3 |
−3.64 |
0.04 |
−3.79 |
Tetracaine | S2/S4 | −23.1e | 3.51 | −2.45 | −3.54 | −0.16 | −2.86 |
a Summed contributions from the sidechains of the four same-number residues and from both K ions. Contributions from backbones may be large, especially for Thr74 and Gly99, which may be tested by synthetic replacement with unnatural amino acids. bOther top contributors are Ser102 (−0.67), Leu36 (−0.86), Val97 (−0.61), Thr33 (−0.35), H2O at site S4 (−0.57), Val106 (−0.36) and Met96 (−0.50). cAnother top contributor is Thr107 (−0.68). dOther top contributors are Val106 (−0.93) and Thr107 (−0.37). eAnother top contributor is Thr107 (−3.53).