TABLE 4.
Classes of genes regulated by PRV-Be and HSV-1(F) infection
Functional class | No. of genes | PRV only | HSV only | PRV and HSV |
---|---|---|---|---|
Signaling | 146 | 47 | 58 | 41 |
Metabolism | 138 | 46 | 49 | 43 |
Cell adhesion | 96 | 11 | 38 | 47 |
Cellular transport | 85 | 37 | 20 | 28 |
Transcription factor | 55 | 28 | 12 | 15 |
Neuronal | 53 | 16 | 22 | 15 |
Stress response | 49 | 21 | 15 | 13 |
Channels and transporters | 42 | 7 | 19 | 16 |
Immunity | 41 | 9 | 17 | 15 |
Kinase | 38 | 15 | 10 | 13 |
Protein folding | 36 | 15 | 14 | 7 |
Nucleus and nuclear matrix | 34 | 13 | 14 | 7 |
Ribosomal proteins | 25 | 20 | 2 | 3 |
Oncogenesis | 24 | 10 | 5 | 9 |
Hormone related | 22 | 5 | 5 | 12 |
Apoptosis | 20 | 8 | 8 | 4 |
RNA-binding proteins | 18 | 9 | 3 | 6 |
Cell cycle related | 17 | 4 | 7 | 6 |
Cytokine or chemokine | 15 | 6 | 7 | 2 |
Electron transport | 21 | 5 | 9 | 7 |
Growth factor | 12 | 0 | 7 | 5 |
Prostaglandin related | 12 | 2 | 5 | 5 |
Peroxisome related | 8 | 3 | 3 | 2 |
Translation | 6 | 2 | 2 | 2 |
Unclassified | 117 | 24 | 42 | 51 |
ESTs | 419 | 158 | 137 | 124 |
Total | 1,549 | 521 | 530 | 498 |