Table 1.
Serotonin cell-specific and enriched genes
| Gene symbol | Probe set ID | pSI | Name |
|---|---|---|---|
| Acsl4 | 1451828_a_at | 6.54E-04 | Acyl-CoA synthetase long-chain family member 4 |
| Ankrd2 | 1419621_at | 1.72E-03 | Ankyrin repeat domain 2 (stretch responsive muscle) |
| Apoa2 | 1417950_a_at | 9.57E-03 | Apolipoprotein A-II |
| Arhgdig | 1448660_at | 4.87E-04 | Rho GDP dissociation inhibitor (GDI) gamma |
| Asb4 | 1433919_at | 1.91E-06 | Ankyrin repeat and SOCS box-containing protein 4 |
| Celf6 | 1429790_at | 8.40E-03 | Cugbp and Elav-like family member 6, RNA binding protein |
| C1qtnf2 | 1431079_at | 8.01E-03 | C1q and tumor necrosis factor related protein 2 |
| Calcr | 1418688_at | 1.91E-06 | Calcitonin receptor |
| Calr3 | 1453232_at | 2.20E-03 | Calreticulin 3 |
| Cckar | 1421195_at | 1.43E-03 | Cholecystokinin A receptor |
| Cd1d1 | 1449131_s_at, 1449130_at | 1.91E-06 | CD1d1 antigen |
| Ceacam10 | 1448573_a_at, 1417074_at | 1.91E-06 | CEA-related cell adhesion molecule 10 |
| Cep63 | 1436274_at | 1.91E-06 | Similar to protein C6orf117 |
| Chodl | 1451440_at | 3.57E-03 | Chondrolectin |
| Ciapin1 | 1438163 xat | 1.97E-03 | Rhomboid domain containing 2 |
| Cited1 | 1449031_at | 1.91E-06 | Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1 |
| Col7a1 | 1419613_at | 1.91E-06 | Procollagen, type VII, alpha 1 |
| Cpa3 | 1448730_at | 1.91E-06 | Carboxypeptidase A3, mast cell |
| Cpne8 | 1430521_s_at, 1430520_at | 2.19 to 3.24E-03 | Copine VIII |
| Cryba2 | 1419011_at | 1.91E-06 | Crystallin, β A2 |
| Cthrc1 | 1452968_at | 5.54E-05 | Collagen triple helix repeat containing 1 |
| Ctla2b | 1416811_s_at, 1448471_a_at | 1.91E-06 | cytotoxic T lymphocyte-associated protein 2 β |
| Cxcl7 | 1418480_at | 1.91E-06 | Chemokine (C-X-C motif) ligand 7 |
| Ddc | 1430591_at, 1426215_at | 1.91E-06 | Dopa decarboxylase |
| Dlk1 | 1449939_s_at | 1.91E-06 | Delta-like 1 homolog (Drosophila) |
| Dnajc12 | 1417441_at | 3.44E-05 | DnaJ (Hsp40) homolog, subfamily C, member 12 |
| E2f5 | 1434493_at | 4.57E-04 | E2F transcription factor 5, p130-binding |
| En1 | 1418618_at | 1.34E-05 | Engrailed 1 |
| Esm1 | 1449280_at | 2.87E-05 | Endothelial cell-specific molecule 1 |
| Fbxw4 | 1442674_at | 7.26E-03 | F-box and WD-40 domain protein 4 |
| Fev | 1425886_at | 1.91E-06 | FEV (ETS oncogene family) |
| Fgd5 | 1460578_at | 1.91E-06 | FYVE, RhoGEF. and PH domain containing 5 |
| Foxa1 | 1418496_at | 7.42E-03 | Forkhead box A1 |
| Fxyd5 | 1418296_at | 1.91E-06 | FXYD domain-containing ion transport regulator 5 |
| Fxyd6 | 1417343_at | 9.95E-03 | FXYD domain-containing ion transport regulator 6 |
| Gas5 | 1449410_a_at | 2.42E-04 | Growth arrest-specific 5 (non-protein coding) |
| Gata2 | 1428816_a_at, 1450333_a_at | 1.91E-06 | GATA binding protein 2 |
| Gata3 | 1448886_at | 1.91E-06 | GATA binding protein 3 |
| Gch | 1429692_s_at, 1420499_at | 1.91E-06 | GTP cyclohydrolase 1 |
| Glra2 | 1434098_at | 2.58E-04 | Glycine receptor, α 2 subunit |
| Gm1574 | 1446591_at | 1.91E-06 | Gene model 1574, (NCBI) |
| Gnas | 1421740_at | 6.19E-04 | GNAS (guanine nucleotide binding protein, α stimulating) complex locus |
| Gng2 | 1418451_at | 6.11E-03 | Guanine nucleotide binding protein (G protein), γ 2 subunit |
| Gnpda2 | 1457230_at | 3.19E-04 | Glucosamine-6-phosphate deaminase 2 |
| Gpr1 | 1460123_at | 5.89E-04 | G protein-coupled receptor 1 |
| Gpr4 | 1457745_at | 1.91E-06 | G protein-coupled receptor 4 |
| Gpx3 | 1449106_at | 1.34E-05 | Glutathione peroxidase 3 |
| Gstm6 | 1422072_a_at | 1.83E-04 | Glutathione S-transferase, μ 1 |
| Guca1a | 1421061_at | 1.91E-06 | Guanylate cyclase activator 1a (retina) |
| Gus | 1430332_a_at | 3.05E-03 | Glucuronidase, β |
| H2-Q1 | 1418734_at | 1.91E-06 | histocompatibility 2, Q region locus 1 |
| Hcrtr1 | 1436295_at | 1.91E-06 | Hypocretin (orexin) receptor 1 |
| Hoxb3 | 1456229_at | 4.80E-03 | Homeo box B3 |
| Hs6st2 | 1420938_at, 1450047_at | 2.05E-04 to 1.91E-06 | Heparan sulfate 6-O-sulfotransferase 2 |
| Htr1a | 1438710_at | 1.91E-06 | 5-Hydroxytryptamine (serotonin) receptor 1A |
| Htr1d | 1440166_x_at, 1440741_at | 4.22E-04 to 1.91E-06 | 5-Hydroxytryptamine (serotonin) receptor 1D |
| Htr5b | 1422196_at | 1.91E-06 | 5-Hydroxytryptamine (serotonin) receptor 5B |
| Igh-6 | 1427351_s_at, 1427329_a_at | 5.75E-03 to 1.91E-06 | Immunoglobulin heavy chain 6 (heavy chain of IgM) |
| Igh-VJ558 | 1425763_x_at, 1421653_a_at | 3.82 to 1.91E-06 | Immunoglobulin heavy chain (J558 family) |
| Il1r1 | 1448950_at | 7.70E-04 | Interleukin 1 receptor, type I |
| Ing1 | 1456857_at | 2.10E-05 | Inhibitor of growth family, member 1 |
| Irs4 | 1441429_at | 1.91E-06 | Insulin receptor substrate 4 |
| Klk27 | 1421587_at | 1.91E-06 | Kallikrein 1-related peptidase b27 |
| Krt2–1 | 1422481_at | 6.65E-03 | Keratin complex 2, basic, gene 1 |
| Lgals8 | 1422661_at | 4.22E-03 | Lectin, galactose binding, soluble 8 |
| Lst1 | 1425548_a_at | 1.92E-03 | Leukocyte specific transcript 1 |
| Maob | 1434354_at | 1.91E-06 | Monoamine oxidase B |
| Mbd1 | 1430838_x_at, 1453678_at | 4.20E-03 to 7.45E-05 | Methyl-CpG binding domain protein 1 |
| Mcpt5 | 1449456_a_at | 7.07E-05 | Chymase 1, mast cell |
| Nanos1 | 1436648_at | 8.47E-03 | Nanos homolog 1 (Drosophila) |
| Nkx6-1 | 1425828_at | 1.10E-03 | NK6 transcription factor related, locus 1 (Drosophila) |
| Nos3 | 1434092_at | 8.57E-03 | Nitric oxide synthase 3 antisense |
| Nrl | 1450946_at | 1.91E-06 | Neural retina leucine zipper gene |
| Oas1e | 1416847_s_at | 1.91E-06 | 2′-5′ Oligoadenylate synthetase 1E |
| Pcbd | 1418713_at | 1.09E-04 | Pterin 4 α carbinolamine dehydratase |
| Pcdha4 | 1424341_s_at | 3.91E-03 | Protocadherin α 4 |
| Pcdha6 | 1451769_s_at | 7.28E-03 | Protocadherin α 6 |
| Pcdhac1 | 1425017_at | 1.91E-06 | Protocadherin α subfamily C, 1 |
| Pcsk1 | 1421396_at | 1.91E-06 | Proprotein convertase subtilisin/kexin type 1 |
| Pcsk5 | 1451406_a_at, 1437339_s_at | 2.89E-03 to 6.66E-03 | Proprotein convertase subtilisin/kexin type 5 |
| Pdzk8 | 1439088_at | 1.91E-06 | PDZ domain containing 8 |
| Prph1 | 1422530_at | 3.16E-03 | Peripherin 1 |
| Ptger3 | 1450344_a_at | 1.91E-06 | Prostaglandin E receptor 3 (subtype EP3) |
| Resp18 | 1417988_at | 2.03E-04 | Regulated endocrine-specific protein 18 |
| Rims3 | 1459042_at | 1.75E-03 | Regulating synaptic membrane exocytosis 3 |
| Rpgrip1 | 1454231_a_at | 1.91E-06 | Retinitis pigmentosa GTPase regulator interacting protein 1 |
| Rph3al | 1444409_at | 2.10E-05 | Rabphilin 3A-like (without C2 domains) |
| Rpl37a | 1416217_a_at | 9.57E-03 | Ribosomal protein L37a |
| Rps27 | 1460699_at | 2.10E-05 | Ribosomal protein S27 |
| Saa1 | 1419075_s_at | 1.51E-04 | Serum amyloid A1 |
| Scg2 | 1450708_at | 3.12E-04 | Secretogranin II |
| Scn9a | 1442333_a_at, 1442810_x_at, 1442809_at | 1.91E-06 | Sodium channel, voltage-gated, type IX, α |
| Siat8f | 1456147_at, 1456440_s_at | 9.94E-05 to 1.91E-06 | ST8 α-N-acetyl-neuraminide α-2,8-sialyltransferase 6 |
| Slc18a2 | 1437079_at | 1.91E-06 | Solute carrier family 18 (vesicular monoamine), member 2 |
| Slc22a3 | 1420444_at | 1.91E-06 | Solute carrier family 22 (organic cation transporter), member 3 |
| Slc6a4 | 1417150_at | 1.91E-06 | Solute carrier family 6 (neurotransmitter transporter, serotonin), member 4 |
| Sln | 1420884_at | 3.20E-03 | Sarcolipin |
| Sncg | 1417788_at | 1.91E-06 | Synuclein, γ |
| Stard3 nl | 1430274_a_at | 7.55E-03 | STARD3 N-terminal like |
| Stk32b | 1431236_at | 1.91E-06 | Serine/threonine kinase 32B |
| Swam2 | 1449191_at | 1.91E-06 | WAP four-disulfide core domain 12 |
| Tinag | 1419314_at | 1.91E-06 | Tubulointerstitial nephritis antigen |
| Tmie | 1441926_x_at, 1443964_at | 1.26E-03 to 5.76E-03 | Transmembrane inner ear |
| Tnfrsf11b | 1449033_at | 4.80E-03 | Tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin) |
| Tph2 | 1435314_at | 1.91E-06 | Tryptophan hydroxylase 2 |
| Trh | 1418756_at | 1.91E-06 | Thyrotropin releasing hormone |
| Trpm4 | 1435549_at | 5.66E-03 | Transient receptor potential cation channel, subfamily M, member 4 |
| Twsg1 | 1441302_at | 8.37E-03 | Twisted gastrulation homolog 1 (Drosophila) |
| Zar1 | 1434494_at | 2.10E-05 | Zygote arrest 1 |
| Zfp622 | 1447775_x_at | 8.60E-04 | Zinc finger protein 622 |
| Zwint | 1444717_at | 7.90E-03 | ZW10 interactor |
Probesets corresponding to all named genes with pSI < 0.01 are listed.