Table 3.
Adjusted and Unadjusted Single SNP Analysis Towards Mycophenolate Related Anemia
SNP no. | rs number | Gene Name | Unadjusted Hazard Ratio (95% CI)1 | p-value | Adjusted Hazard Ratio (95% CI)2 | p-value | MAF3 | |
---|---|---|---|---|---|---|---|---|
1 | rs568408 | IL12A | 1.99 (1.40–2.83) | 0.000124 | 1.98 (1.39–2.82) | 0.000144 | A | 0.15 |
2 | rs2037483 | HUS15 | 0.58 (0.42–0.79) | 0.00058 | 0.54 (0.39–0.74) | 0.000164 | A | 0.50 |
3 | rs1056663 | HUS15 | 0.58 (0.43–0.80) | 0.00068 | 0.54 (0.39–0.75) | 0.000184 | A | 0.49 |
4 | rs11572076 | CYP2C86 | 3.44(1.90–6.25) | 0.000054 | 3.24 (1.70–6.20) | 0.000374 | A | 0.03 |
5 | rs11572103 | CYP2C86 | 3.40 (1.92–6.03) | 0.000034 | 3.04 (1.61–5.73) | 0.00059 | T | 0.03 |
6 | rs5005 | ADM | 3.26 (1.62–6.57) | 0.00090 | 3.52 (1.68–7.63) | 0.00085 | G | 0.01 |
7 | rs3797897 | MSH3 | 1.95 (1.33–2.86) | 0.00058 | 1.89 (1.28–2.79) | 0.00137 | G | 0.09 |
8 | rs12441817 | CYP1A1 | 1.76 (1.24–2.50) | 0.00143 | 1.77 (1.24–2.51) | 0.00150 | C | 0.13 |
9 | rs4135113 | TDG | 2.27 (1.28–4.01) | 0.00479 | 2.48 (1.38–4.43) | 0.00227 | A | 0.05 |
10 | rs2227551 | PLAU7 | 1.61 (1.20–2.17) | 0.00166 | 1.57 (1.17–2.11) | 0.00261 | G | 0.32 |
11 | rs2239393 | COMT | 1.61 (1.20–2.17) | 0.00155 | 1.57 (1.17–2.11) | 0.00292 | G | 0.37 |
12 | rs3087243 | CTLA4 | 0.57 (0.40–0.79) | 0.00093 | 0.60 (0.43–0.84) | 0.00300 | A | 0.38 |
13 | rs4633 | COMT | 0.61 (0.45–0.83) | 0.00167 | 0.63 (0.46–0.85) | 0.00301 | T | 0.48 |
14 | rs610899 | MRE11A8 | 1.48 (1.11–1.98) | 0.00811 | 1.55 (1.16–2.07) | 0.00322 | G | 0.42 |
15 | rs4303 | ACE | 4.84 (2.03–11.6) | 0.00038 | 3.74 (1.54–9.08) | 0.00357 | T | 0.02 |
16 | rs2227552 | C10orf557 | 1.55 (1.14–2.11) | 0.00504 | 1.57 (1.16–2.13) | 0.00380 | C | 0.28 |
17 | rs2010963 | VEGFA | 0.58 (0.40–0.84) | 0.00364 | 0.58 (0.40–0.84) | 0.00449 | C | 0.31 |
18 | rs518276 | MRE11A8 | 1.49 (1.13–1.98) | 0.00527 | 1.50 (1.13–1.99) | 0.00457 | A | 0.41 |
19 | rs12922317 | RUNDC2A | 1.46 (1.09–1.95) | 0.01046 | 1.50 (1.13–1.99) | 0.00544 | G | 0.34 |
20 | rs497763 | ANKRD49 | 1.46 (1.09–1.95) | 0.01086 | 1.51 (1.13–2.02) | 0.00566 | A | 0.44 |
21 | rs373496 | TNFRSF17 | 2.83 (1.47–5.47) | 0.00195 | 2.55 (1.31–4.96) | 0.00572 | T | 0.03 |
22 | rs3020314 | ESR1 | 1.49 (1.11–1.99) | 0.00713 | 1.50 (1.13–2.01) | 0.00574 | C | 0.41 |
23 | rs1272744 | MRE11A8 | 1.50 (1.12–1.99) | 0.00615 | 1.49 (1.12–1.99) | 0.00675 | C | 0.40 |
24 | rs1049631 | IL4R | 0.64 (0.47–0.87) | 0.00464 | 0.65 (0.48–0.89) | 0.00691 | A | 0.48 |
25 | rs1056836 | CYP1B1 | 0.70 (0.52–0.95) | 0.02053 | 0.66 (0.48–0.89) | 0.00694 | G | 0.48 |
26 | rs2193587 | DGKG | 0.51 (0.33–0.79) | 0.00279 | 0.55 (0.35–0.85) | 0.00705 | G | 0.20 |
27 | rs2740560 | CYP3A79 | 1.71 (1.21–2.41) | 0.00228 | 1.62 (1.14–2.31) | 0.00716 | A | 0.18 |
28 | rs2687140 | CYP3A79 | 1.72 (1.22–2.42) | 0.00206 | 1.62 (1.14–2.30) | 0.00718 | A | 0.18 |
29 | rs2074086 | ABCC1 | 0.63 (0.45–0.88) | 0.00637 | 0.63 (0.45–0.88) | 0.00754 | C | 0.38 |
30 | rs836802 | MSH3 | 0.58 (0.38–0.88) | 0.00988 | 0.56 (0.37–0.86) | 0.00767 | G | 0.24 |
31 | rs3813867 | CYP2E1 | 2.10 (1.24–3.54) | 0.00828 | 2.03 (1.2–3.42) | 0.00552 | C | 0.04 |
32 | rs1946519 | IL18 | 0.66 (0.49–0.90) | 0.00847 | 0.66 (0.49–0.90) | 0.00955 | A | 0.40 |
33 | rs943975 | CYP2E1 | 1.65 (1.14–2.39) | 0.00860 | 1.64 (1.13–2.36) | 0.00764 | C | 0.16 |
34 | rs20432 | PTGS2 | 1.73 (1.19–2.51) | 0.00909 | 1.54 (1.11–2.13) | 0.00420 | G | 0.23 |
35 | rs2802269 | CDC42BPA | 1.66 (1.11–2.49) | 0.00953 | 1.74 (1.14–2.64) | 0.01489 | G | 0.09 |
36 | rs2020869 | FMO2 | 1.71 (1.20–2.43) | 0.00967 | 1.62 (1.12–2.33) | 0.00317 | G | 0.15 |
SNPs are not adjusted for clinical factors,
adjusted for antiviral use, age, weight, posttransplant dialysis, 2hazard and 95% confidence interval (CI) of developing anemia for each risk allele,
allele associated with the hazard and the minor allele frequency (MAF) in the population,
significant accounting for a FDR of 20%,
HUS1 SNPs are correlated r2=1.0,
CYP2C8 SNPs are correlated r2=0.93,
PLAU and C10orf55 SNPs are correlated r2=0.93,
MRE11A SNPs are correlated r2=0.89,
CYP3A7 SNPs are correlated r2 =0.99.