Table 5.
Adjusted and Unadjusted Single SNP Analysis Towards Mycophenolate Related Leukopenia
SNP no. | rs number | Gene Name | Unadjusted Hazard Ratio (95% CI)1,2 | p-value | Adjusted Hazard Ratio (95% CI)2,3 | p-value | MAF4 | |
---|---|---|---|---|---|---|---|---|
1 | rs1041163 | VCAM15 | 0.58 (0.43–0.77) | 0.00023 | 0.60 (0.44–0.81) | 0.0008 | C | 0.17 |
2 | rs2392221 | VCAM15 | 0.55 (0.40–0.77) | 0.00038 | 0.59 (0.42–0.82) | 0.0016 | T | 0.15 |
3 | rs4149056 | SLCO1B1 | 1.46 (1.14–1.87) | 0.00283 | 1.52 (1.17–1.98) | 0.0017 | C | 0.13 |
4 | rs9658655 | CHGA | 0.52 (0.35–0.77) | 0.00089 | 0.54 (0.36–0.79) | 0.0017 | C | 0.10 |
5 | rs12418 | CHST3 | 1.28 (1.07–1.53) | 0.00726 | 1.34 (1.11–1.62) | 0.002 | A | 0.43 |
6 | rs10759326 | IKBKAP6 | 1.33 (1.09–1.64) | 0.00583 | 1.40 (1.13–1.73) | 0.002 | G | 0.26 |
7 | rs4148950 | CHST37 | 1.28 (1.07–1.53) | 0.00756 | 1.32 (1.1–1.6) | 0.003 | A | 0.43 |
8 | rs10979601 | IKBKAP6 | 1.31 (1.07–1.61) | 0.00932 | 1.37 (1.11–1.7) | 0.004 | T | 0.25 |
9 | rs2020870 | FMO2 | 0.46 (0.29–0.74) | 0.00131 | 0.50 (0.31–0.81) | 0.004 | G | 0.07 |
10 | rs9282626 | CAT | 1.67 (1.17–2.40) | 0.00489 | 1.71 (1.18–2.47) | 0.004 | C | 0.05 |
11 | rs5744934 | POLE | 1.48 (1.15–1.91) | 0.00246 | 1.47 (1.12–1.91) | 0.005 | G | 0.12 |
12 | rs4148947 | CHST37 | 1.26 (1.05–1.52) | 0.01225 | 1.31 (1.08–1.58) | 0.005 | C | 0.43 |
13 | rs2140516 | SLC13A1 | 1.30 (1.08–1.58) | 0.00638 | 1.32 (1.09–1.61) | 0.006 | C | 0.31 |
14 | rs7201683 | WWOX | 1.68 (1.11–2.55) | 0.01413 | 1.81 (1.19–2.76) | 0.006 | G | 0.03 |
15 | rs6941583 | POLH | 1.36 (1.03–1.81) | 0.03209 | 1.49 (1.12–1.99) | 0.006 | T | 0.08 |
16 | rs2706338 | RAD50 | 1.33 (1.07–1.65) | 0.01020 | 1.35 1.08–1.68) | 0.007 | T | 0.18 |
17 | rs1058172 | CYP2D6 | 0.69 (0.49–0.96) | 0.02809 | 0.62 (0.44–0.88) | 0.008 | A | 0.13 |
18 | rs769214 | CAT | 0.72 (0.59–0.88) | 0.00168 | 0.76 (0.62–0.93) | 0.009 | G | 0.36 |
SNPs are not adjusted for clinical factors,
hazard and 95% confidence interval (CI) of developing leukopenia for each risk allele,
Adjusted for corticosteroid use, weight, prior kidney transplant, donor (living vs deceased), CMV serostatus,
allele associated with the hazard and minor allele frequency (MAF) in the population,
VCAM1 SNPs are correlated r2=0.78,
IKBKAP SNPs are correlated r2=0.97,
CHST3 SNPs are correlated r2=0.997.