Table 1. RNA-Seq statistics of E2, P4, TAM, and RU486 treated and non-treated Ishikawa cells.

		Ishikawa E2 & TAM			Ishikawa P4 & RU486
	Non-treated	3 h E2	12 h E2	12 h TAM	3 h P4	12 h P4	12 h RU486
Reads aligned to Tophat	10 465 431	9 967 453	8 093 476	10 912 784	10 628 213	11 058 071	10 983 639
Total genes	16813	16874	16784	16834	16951	16934	16840
% unknown genes	29.07%	29.09%	28.89%	28.86%	29.43%	29.24%	29.06%
% known genes	70.93%	70.91%	71.11%	71.14%	70.57%	70.76%	70.94%
FPKM 0–10	4577	4361	4226	4611	4437	4406	4607
FPKM 10–100	6487	6701	6894	6486	6653	6722	6495
FPKM 100–1000	820	859	767	831	831	807	804
FPKM >1000	41	44	48	47	41	47	40
Significant genes *		1084	1121	1013	1082	1097	546
% endometrium (n = 2) **		98.6%	99.2%	98.6%	98.2%	99.0%	98.5%

^*Significant genes (5% FDR) are counted from known genes and compared to non-treated cells.

^**E2 and P4 significant genes present in human endometrium during the time of embryo implantation.