Table 2.
Locus | Primer | Primer sequence 5’ to 3’: |
Annealing
temperature (°C) |
Orientation | Reference |
---|---|---|---|---|---|
Translation elongation factor-1α | EF1-728F | CATCGAGAAGTTCGAGAAGG | 52 | Forward | Carbone & Kohn (1999) |
EF-2 | GGARGTACCAGTSATCATGTT | 52 | Reverse | O’Donnell et al. (1998) | |
β-tubulin | T1 | AACATGCGTGAGATTGTAAGT | 52 | Forward | O’Donnell & Cigelnik (1997) |
β-Sandy-R | GCRCGNGGVACRTACTTGTT | 52 | Reverse | Stukenbrock et al. (2012) | |
RNA polymerase II second largest subunit | fRPB2-5F | GAYGAYMGWGATCAYTTYGG | 49 | Forward | Liu et al. (1999) |
fRPB2-414R | ACMANNCCCCARTGNGWRTTRTG | 49 | Reverse | Quaedvlieg et al. (2011) | |
LSU | LSU1Fd | GRATCAGGTAGGRATACCCG | 52 | Forward | Crous et al. (2009a) |
LR5 | TCCTGAGGGAAACTTCG | 52 | Reverse | Vilgalys & Hester (1990) | |
ITS | ITS5 | GGAAGTAAAAGTCGTAACAAGG | 52 | Forward | White et al. (1990) |
ITS4 | TCCTCCGCTTATTGATATGC | 52 | Reverse | White et al. (1990) | |
Actin | ACT-512F | ATGTGCAAGGCCGGTTTCGC | 52 | Forward | Carbone & Kohn (1999) |
ACT2Rd | ARRTCRCGDCCRGCCATGTC | 52 | Reverse | Groenewald et al. (2012) | |
Calmodulin | CAL-235F | TTCAAGGAGGCCTTCTCCCTCTT | 50 | Forward | Quaedvlieg et al. (2012) |
CAL2Rd | TGRTCNGCCTCDCGGATCATCTC | 50 | Reverse | Groenewald et al. (2012) |