Table 1. Summary of sequences analysis.
Description | Number |
Before trimming | |
Raw reads | 40.78×106 |
After trimming | |
Clean reads | 39.76×106 |
Clean bases (Mb) | 4.02×103 |
Average length of clean reads (bp) | 101.10 |
GC content (%) | 46.01 |
Q20 percentage (%) | 97.95 |
After assembly | |
Unigenes | 70,300 |
Min length (bp) | 201 |
Max length (bp) | 16,874 |
Average length (bp) | 967 |
N50 (bp) | 1,834 |
N90 (bp) | 354 |