Table 3.
Loop | α | β | Lk | Ψ | Φ | GLacR | GDNA | ΔGDNA |
---|---|---|---|---|---|---|---|---|
A1e | 34 | 33 | 9 | 65.6 | 76.2 | – | 154.4 | 70.2 |
A1f | 34 | 33 | 10 | 48.4 | 72.6 | – | 133.6 | 49.4 |
A2e | 34 | 33 | 8 | 65.2 | 74.9 | – | 153.0 | 68.8 |
A2f | 34 | 33 | 9 | 23.0 | 72.8 | – | 108.1 | 23.9 |
P1e | 34 | 33 | 9 | 90.6 | 80.6 | – | 183.2 | 99.0 |
P1f | 34 | 33 | 10 | 54.8 | 75.7 | – | 142.5 | 58.3 |
P2c | 34 | 33 | 10 | 35.4 | 73.9 | – | 122.4 | 38.2 |
Ee | 61 | 2 | 9 | 54.4 | 73.7 | 2.8±1 | 144.0±1 | 59.8±1 |
Free | – | – | – | 0 | 70.5 | – | 84.2 |
Loops denoted by labels in Figure 6; α, β, Lk, Ψ, Φ, GLacR, GDNA are as in Table 1. “Free” refers to the unbound, linear DNA chain of the (O3*-O1) sequence: AAGCGGGCAGTGAGCGCAACGCAATTAATGTGAGTTAGCTCACTCATTAGGCACCCCAGGCTTTACACTTTATGCTTCCGGCTCGTATGTTGTGTGGAATTGTGAGCGGATAACAATT. Here the O3* and O1 sequences are shown in boldface and the CAP binding site is underlined.